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13_1_20cm_3_scaffold_5218

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_5218_1
Streptomyces sp. NRRL S-495, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..918
DNA (918bp) protein (306aa)
hypothetical protein n=1 Tax=Streptomyces sp. 303MFCol5.2 RepID=UPI000367C065
Uncharacterized protein {ECO:0000313|EMBL:KJY26147.1}; TaxID=1609133 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. NRRL S-495.;"
hypothetical protein
13_1_20cm_3_scaffold_5218_2
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(922..1308)
DNA (387bp) protein (129aa)
Activator of Hsp90 ATPase 1 family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CL99_PSEUX
ATPase {ECO:0000313|EMBL:EWT01464.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-24470.;"
Activator of Hsp90 ATPase 1 family protein
13_1_20cm_3_scaffold_5218_3
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1305..1622)
DNA (318bp) protein (106aa)
ArsR family transcriptional regulator n=1 Tax=Actinopolymorpha alba RepID=UPI00037F1438
ArsR family transcriptional regulator {ECO:0000313|EMBL:AEV82231.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (st
ArsR family transcriptional regulator
13_1_20cm_3_scaffold_5218_4
unknown

Not on your lists

comp(1656..1880)
DNA (225bp) protein (75aa)
UPI00034B632D related cluster n=1 Tax=unknown RepID=UPI00034B632D
13_1_20cm_3_scaffold_5218_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2134..3360)
DNA (1227bp) protein (409aa)
glutamate--cysteine ligase; K06048 carboxylate-amine ligase [EC:6.3.-.-] Tax=RBG_16_Actinobacteria_68_12_curated
Carboxylate-amine ligase Cwoe_5230 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEE4_CONWI
glutamate--cysteine ligase
13_1_20cm_3_scaffold_5218_6
unknown

Not on your lists

comp(3357..3971)
DNA (615bp) protein (205aa)

This feature has no annotations

13_1_20cm_3_scaffold_5218_7
RBG_16_Actinobacteria_70_17_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(3968..4342)
DNA (375bp) protein (125aa)
Endoribonuclease L-PSP n=1 Tax=Acidobacterium sp. (strain MP5ACTX9) RepID=E8X371_ACISM
endoribonuclease L-PSP Tax=RBG_16_Actinobacteria_70_17_curated
endoribonuclease L-PSP
13_1_20cm_3_scaffold_5218_8
Nocardia farcinica, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4643..5095
DNA (453bp) protein (151aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000364A995
Uncharacterized protein {ECO:0000313|EMBL:BAD56451.1}; TaxID=247156 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia farcinica (strain IFM 10152).;"
hypothetical protein
13_1_20cm_3_scaffold_5218_9
unknown

Not on your lists

5183..5329
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_20cm_3_scaffold_5218_10
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(5420..5731)
DNA (312bp) protein (104aa)
Thioredoxin n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9R0C5_9RHOB
trxA; thioredoxin Tax=RBG_16_Actinobacteria_68_12_curated
thioredoxin
13_1_20cm_3_scaffold_5218_11
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

5881..8865
DNA (2985bp) protein (995aa)
Isoleucine--tRNA ligase {ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|SAAS:SAAS00106059};; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-7
Isoleucyl-tRNA synthetase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CG38_THET1
isoleucyl-tRNA synthetase
13_1_20cm_3_scaffold_5218_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8862..9371)
DNA (510bp) protein (170aa)
hydroxymethylbutenyl pyrophosphate reductase (EC:1.17.1.2); K03527 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [EC:1.17.1.2] Tax=RBG_16_Actinobacteria_68_12_curated
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2) id=14430539 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
13_1_20cm_3_scaffold_5218_13
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

10002..13175
DNA (3174bp) protein (1058aa)
multi-sensor signal transduction histidine kinase (EC:2.7.13.3)
GAF sensor signal transduction histidine kinase n=1 Tax=Roseiflexus sp. (strain RS-1) RepID=A5V1N1_ROSS1
two-component sensor histidine kinase Tax=GWA2_Rokubacteria_73_35_curated
13_1_20cm_3_scaffold_5218_14
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13150..13635
DNA (486bp) protein (162aa)
Response regulator n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D153_PELTS
Response regulator {ECO:0000313|EMBL:BAF60012.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum (strai
OmpR; response regulator
13_1_20cm_3_scaffold_5218_trna_1
unknown

Not on your lists

13665..13739
DNA (75bp)
transferRNA
13_1_20cm_3_scaffold_5218_15
Rhodococcus pyridinivorans, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13806..14807
DNA (1002bp) protein (334aa)
Ribonuclease BN n=1 Tax=Rhodococcus pyridinivorans AK37 RepID=H0JQ92_9NOCA
Ribonuclease BN {ECO:0000313|EMBL:EHK84311.1}; TaxID=1114960 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus pyridinivorans AK37.;"
ribonuclease BN
13_1_20cm_3_scaffold_5218_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(14716..15450)
DNA (735bp) protein (245aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_5218_trna_2
unknown

Not on your lists

15474..15544
DNA (71bp)
transferRNA
13_1_20cm_3_scaffold_5218_17
unknown

Not on your lists

comp(15544..16026)
DNA (483bp) protein (161aa)

This feature has no annotations

13_1_20cm_3_scaffold_5218_18
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16023..17885)
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CFF3B
Vegetative cell wall protein gp1 {ECO:0000313|EMBL:EWM10258.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
hypothetical protein
13_1_20cm_3_scaffold_5218_19
Amycolatopsis methanolica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17999..18730)
DNA (732bp) protein (244aa)
Serine protease PepA n=1 Tax=Mycobacterium sp. (strain JDM601) RepID=F5YUX1_MYCSD
Serine protease {ECO:0000313|EMBL:AIJ24322.1}; TaxID=1068978 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis methanolica 239.;"
serine protease
Displaying 21 items

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