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13_1_20cm_3_scaffold_533

Search features with annotation key words

Displaying items 1-30 of 55 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_533_1
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

1..933
DNA (933bp) protein (311aa)
Translation initiation factor IF-2 n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE23_CONWI
translation initiation factor IF-2; K02519 translation initiation factor IF-2 Tax=RBG_16_Actinobacteria_67_10_curated
translation initiation factor IF-2
13_1_20cm_3_scaffold_533_2
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

950..1246
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE24_CONWI
hypothetical protein; K09764 hypothetical protein Tax=RBG_16_Actinobacteria_67_10_curated
hypothetical protein
13_1_20cm_3_scaffold_533_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1243..1971)
DNA (729bp) protein (243aa)
membrane protein n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C7527
hypothetical protein; K07090 Tax=RBG_16_Actinobacteria_68_12_curated
putative sulfonate transporter
13_1_20cm_3_scaffold_533_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2007..2354
DNA (348bp) protein (116aa)
Ribosome-binding factor A n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE25_CONWI
ribosome-binding factor A; K02834 ribosome-binding factor A Tax=RBG_16_Actinobacteria_68_12_curated
ribosome-binding factor A
13_1_20cm_3_scaffold_533_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

2326..3324
DNA (999bp) protein (333aa)
Phosphoesterase RecJ domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE26_CONWI
phosphoesterase RecJ domain-containing protein; K06881 phosphoesterase RecJ domain-containing protein Tax=RBG_16_Actinobacteria_68_12_curated
phosphoesterase RecJ domain-containing protein
13_1_20cm_3_scaffold_533_6
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3344..3958
DNA (615bp) protein (205aa)
tRNA pseudouridine synthase B; K03177 tRNA pseudouridine55 synthase [EC:5.4.99.25] Tax=RBG_16_Actinobacteria_68_12_curated
tRNA pseudouridine synthase B id=2339343 bin=GWD1_TM7_39_7 species=RAAC3_TM7 genus=RAAC3_TM7 taxon_order=RAAC3_TM7 taxon_class=RAAC3_TM7 phylum=TM7 tax=GWD1_TM7_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D2_39_7
pseudouridine synthase
13_1_20cm_3_scaffold_533_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3955..4821
DNA (867bp) protein (289aa)
riboflavin biosynthesis protein RibF; K11753 riboflavin kinase / FMN adenylyltransferase [EC:2.7.1.26 2.7.7.2] Tax=RBG_16_Actinobacteria_68_12_curated
riboflavin kinase n=1 Tax=Frankia sp. BCU110501 RepID=UPI000369B874
bifunctional riboflavin kinase/FMN adenylyltransferase
13_1_20cm_3_scaffold_533_8
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

comp(4854..6269)
DNA (1416bp) protein (472aa)
putative gamma-glutamyltranspeptidase; K00681 gamma-glutamyltranspeptidase [EC:2.3.2.2] Tax=RBG_16_Actinobacteria_67_10_curated
gamma-glutamyltransferase (EC:2.3.2.2)
Gamma-glutamyltransferase n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3Q6I7_STANL
13_1_20cm_3_scaffold_533_9
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6421..7365
DNA (945bp) protein (315aa)
Nod factor export ATP-binding protein I n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0LA22_9ACTO
Nod factor export ATP-binding protein I {ECO:0000313|EMBL:CCH20669.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora
ABC transporter-like protein
13_1_20cm_3_scaffold_533_10
Acidothermus cellulolyticus, Acidothermus, Acidothermales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7362..8129
DNA (768bp) protein (256aa)
ABC-2 type transporter n=1 Tax=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) RepID=A0LSV8_ACIC1
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=351607 species="Bacteria; Actinobacteria; Acidothermales; Acidothermaceae; Acidothermus.;" source="Acidothermus cellulolyticus (strain
ABC-2 type transporter
13_1_20cm_3_scaffold_533_11
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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8126..8899
DNA (774bp) protein (258aa)
ABC-type polysaccharide/polyol phosphate export systems permease; K09694 lipooligosaccharide transport system permease protein Tax=GWC2_RIF_CHLX_73_18_curated
ABC-type polysaccharide/polyol phosphate export systems, permease component id=4531822 bin=GWC2_Chloroflexi_73_18 species=Blastococcus saxobsidens genus=Blastococcus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
ABC transporter
13_1_20cm_3_scaffold_533_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


8985..9254
DNA (270bp) protein (90aa)
30S ribosomal protein S15 n=1 Tax=Patulibacter americanus RepID=UPI0003B4BA41
30S ribosomal protein S15; K02956 small subunit ribosomal protein S15 Tax=RBG_16_Actinobacteria_67_10_curated
30S ribosomal protein S15
13_1_20cm_3_scaffold_533_13
BJP_IG2158_Actinobacteria_57_21, Bacteria

Not on your lists

9351..11831
DNA (2481bp) protein (827aa)
polynucleotide phosphorylase/polyadenylase (EC:2.7.7.8)
polyribonucleotide nucleotidyltransferase n=1 Tax=Desulfurispora thermophila RepID=UPI00036EB866
Tax=BJP_IG2158_Actinobacteria_57_21
13_1_20cm_3_scaffold_533_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12245..12901
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QN33_9DELT
lanthionine synthetase C-like family protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_533_15
Natronococcus amylolyticus, Natronococcus, Natrialbales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

12901..13647
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Natronococcus amylolyticus DSM 10524 RepID=L9X3S9_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELY56272.1}; TaxID=1227497 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronococcus.;" source="Natronococcus amylolyticus DSM
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_3_scaffold_533_16
Candidatus Microthrix parvicella, Candidatus Microthrix, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13607..14542)
DNA (936bp) protein (312aa)
Putative Galactokinase {ECO:0000313|EMBL:CCM62093.1}; EC=2.7.1.6 {ECO:0000313|EMBL:CCM62093.1};; TaxID=1229780 species="Bacteria; Actinobacteria; Candidatus Microthrix.;" source="Candidatus Microthrix
hypothetical protein n=1 Tax=Candidatus Microthrix parvicella RepID=UPI000367AF02
hypothetical protein
13_1_20cm_3_scaffold_533_17
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

14557..15774
DNA (1218bp) protein (406aa)
Glycoside hydrolase family 4 n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDQ3_THET1 rbh
Glycoside hydrolase family 4 {ECO:0000313|EMBL:ACZ41059.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
glycoside hydrolase family protein
13_1_20cm_3_scaffold_533_18
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

15782..17071
DNA (1290bp) protein (430aa)
Peptidase M16 domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE35_CONWI
peptidase M16 domain-containing protein Tax=RBG_16_Actinobacteria_67_10_curated
peptidase M16 domain-containing protein
13_1_20cm_3_scaffold_533_19
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17068..17673
DNA (606bp) protein (202aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
4-hydroxy-tetrahydrodipicolinate reductase n=1 Tax=Patulibacter medicamentivorans RepID=H0E1Z1_9ACTN
dapB; dihydrodipicolinate reductase
13_1_20cm_3_scaffold_533_20
Mycobacterium smegmatis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17670..18122
DNA (453bp) protein (151aa)
Acetyltransferase n=1 Tax=Mycobacterium smegmatis JS623 RepID=L0J1R1_MYCSM
Acetyltransferase {ECO:0000313|EMBL:AGB24196.1}; TaxID=710686 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium smegmatis JS623.;"
acetyltransferase
13_1_20cm_3_scaffold_533_21

Not on your lists

comp(18098..18529)
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=uncultured organism CA37 RepID=E9L1F4_9ZZZZ
Putative uncharacterized protein {ECO:0000313|EMBL:ADU56033.1}; TaxID=941420 species="unclassified sequences; environmental samples.;" source="uncultured organism CA37.;"
GCN5-related N-acetyltransferase
13_1_20cm_3_scaffold_533_22
Desulfotomaculum kuznetsovii, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18549..19433
DNA (885bp) protein (295aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
4-hydroxy-tetrahydrodipicolinate synthase n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CM81_DESK7
Dihydrodipicolinate synthase
13_1_20cm_3_scaffold_533_23
RBG_13_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(19344..21206)
DNA (1863bp) protein (621aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI0003823607
metal dependent phosphohydrolase Tax=RBG_13_Chloroflexi_56_8_curated
HD domain-containing protein
13_1_20cm_3_scaffold_533_24
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

21301..22959
DNA (1659bp) protein (553aa)
Beta-lactamase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FE40_CONWI
Beta-lactamase domain protein {ECO:0000313|EMBL:ADB51656.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
beta-lactamase
13_1_20cm_3_scaffold_533_25
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

22959..23435
DNA (477bp) protein (159aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_533_26
Frankia symbiont of Datisca glomerata, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23437..23910)
DNA (474bp) protein (158aa)
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein n=1 Tax=Frankia symbiont subsp. Datisca glomerata RepID=F8B6G6_FRADG
Pyridoxamine 5'-phosphate oxidase-related FMN-binding protein {ECO:0000313|EMBL:AEH09262.1}; TaxID=656024 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia symbion
pyridoxamine 5'-phosphate oxidase-like FMN-binding protein
13_1_20cm_3_scaffold_533_27
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23935..24738
DNA (804bp) protein (268aa)
PfkB domain-containing protein; K00852 ribokinase [EC:2.7.1.15] Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000376313F
PfkB domain-containing protein
13_1_20cm_3_scaffold_533_28
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

24735..25652
DNA (918bp) protein (306aa)
rihA; ribonucleoside hydrolase 1; K01250 pyrimidine-specific ribonucleoside hydrolase [EC:3.2.-.-] Tax=RBG_16_Actinobacteria_68_12_curated
Inosine-uridine preferring nucleoside hydrolase superfamily protein; K01250 pyrimidine-specific ribonucleoside hydrolase [EC:3.2.-.-] id=14629910 bin=bin8_Chloro species=Aeromonas veronii genus=Aeromonas taxon_order=Aeromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin8_Chloro organism_group=Chloroflexi
ribosylpyrimidine nucleosidase (EC:3.2.2.8)
13_1_20cm_3_scaffold_533_29
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

25649..26458
DNA (810bp) protein (270aa)
Extradiol ring-cleavage dioxygenase class III protein subunit B n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U3C0_DEIML
extradiol ring-cleavage dioxygenase class III protein subunit B Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
extradiol ring-cleavage dioxygenase class III protein subunit B
13_1_20cm_3_scaffold_533_30
unknown

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26494..27384
DNA (891bp) protein (297aa)

This feature has no annotations

Displaying items 1-30 of 55 in total

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