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13_1_20cm_3_scaffold_542

Search features with annotation key words

Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_542_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

3..923
DNA (921bp) protein (307aa)
ATP-dependent chaperone ClpB n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FAG6_CONWI
ATPase Tax=RBG_16_Actinobacteria_68_12_curated
ATP-dependent chaperone ClpB
13_1_20cm_3_scaffold_542_2
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

884..1528
DNA (645bp) protein (215aa)
AAA ATPase, ClpA/B n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IMX7_ANADE
clpB; chaperone Tax=RBG_16_Actinobacteria_68_12_curated
ATP-dependent chaperone ClpB
13_1_20cm_3_scaffold_542_3
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1521..2237
DNA (717bp) protein (239aa)
Methyltransferase domain protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KUJ5_9ACTO
Methyltransferase domain protein {ECO:0000313|EMBL:EKX64277.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03
type 11 methyltransferase
13_1_20cm_3_scaffold_542_4
unknown

Not on your lists

comp(2328..2831)
DNA (504bp) protein (168aa)

This feature has no annotations

13_1_20cm_3_scaffold_542_5
R_Nitrospirae_66_17, Nitrospirae, Bacteria

Not on your lists

2858..3475
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Methylibium petroleiphilum (strain PM1) RepID=A2SKC5_METPP
pyridoxamine 5'-phosphate oxidase-like protein; K07006 Tax=RIFCSPHIGHO2_01_FULL_Nitrospirae_66_17_curated
pyridoxamine 5-phosphate oxidase-related FMN-binding protein
13_1_20cm_3_scaffold_542_6
unknown

Not on your lists

comp(3538..3855)
DNA (318bp) protein (106aa)

This feature has no annotations

13_1_20cm_3_scaffold_542_7
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

4062..4658
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADJ6_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH40573.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_542_8
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

4655..5503
DNA (849bp) protein (283aa)
Uncharacterized protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TJX4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:EFH89731.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="
13_1_20cm_3_scaffold_542_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

5513..6295
DNA (783bp) protein (261aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_542_10
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

6240..6482
DNA (243bp) protein (81aa)
Hypothetical conserved protein n=1 Tax=uncultured prokaryote RepID=H5S8V3_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EHN12366.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter me
GYD domain superfamily
13_1_20cm_3_scaffold_542_11
unknown

Not on your lists

comp(6522..6686)
DNA (165bp) protein (55aa)

This feature has no annotations

13_1_20cm_3_scaffold_542_12
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6837..7853
DNA (1017bp) protein (339aa)
ABC transporter-like protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FD09_VERMA
ABC transporter-like protein {ECO:0000313|EMBL:AEB44841.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strai
ABC transporter
13_1_20cm_3_scaffold_542_13
Deinococcus phoenicis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

7850..8701
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Desulfurispora thermophila RepID=UPI00036B6950
Uncharacterized protein {ECO:0000313|EMBL:EYB67592.1}; TaxID=1476583 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="Deinococcus phoenicis.;"
hypothetical protein
13_1_20cm_3_scaffold_542_14
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(8624..9538)
DNA (915bp) protein (305aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036B7650
indigoidine synthase Tax=RBG_16_Actinobacteria_68_12_curated
indigoidine synthase A-like protein
13_1_20cm_3_scaffold_542_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(9535..10341)
DNA (807bp) protein (269aa)
2-keto-3-deoxygluconate kinase, KdgK Tax=RBG_16_Actinobacteria_68_12_curated
PfkB domain-containing protein id=14628771 bin=bin8_Chloro species=Catenulispora acidiphila genus=Catenulispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi
ribokinase-like domain-containing protein
13_1_20cm_3_scaffold_542_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

10359..10559
DNA (201bp) protein (67aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_542_17
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10548..11795)
DNA (1248bp) protein (416aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_542_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

12030..12302
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Amphimedon queenslandica RepID=I1ER84_AMPQE
FmdB transcriptional regulator Tax=RBG_16_Actinobacteria_68_12_curated
putative regulatory protein, FmdB family
13_1_20cm_3_scaffold_542_19
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(12324..13493)
DNA (1170bp) protein (390aa)
Cell envelope-related transcriptional attenuator n=1 Tax=Intrasporangium calvum (strain ATCC 23552 / DSM 43043 / JCM 3097 / NBRC 12989 / 7 KIP) RepID=E6SER4_INTC7
cell envelope-like transcriptional attenuator Tax=RBG_16_Actinobacteria_68_12_curated
cell envelope-related transcriptional attenuator
13_1_20cm_3_scaffold_542_20
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13519..14415
DNA (897bp) protein (299aa)
ROK family protein; K00845 glucokinase [EC:2.7.1.2] Tax=RBG_16_Actinobacteria_68_12_curated
ROK family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEH8_CONWI
ROK family protein
13_1_20cm_3_scaffold_542_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

14419..15219
DNA (801bp) protein (267aa)
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; K07056 16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:2.1.1.198] Tax=RBG_16_Actinobacteria_68_12_curated
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Patulibacter medicamentivorans RepID=H0E5D1_9ACTN
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase
13_1_20cm_3_scaffold_542_22
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists


16152..17765
DNA (1614bp) protein (538aa)
methionyl-tRNA synthetase; K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RBG_16_Actinobacteria_64_13_curated
Methionine--tRNA ligase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEH3_CONWI
methionyl-tRNA synthetase
13_1_20cm_3_scaffold_542_23
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

17762..18487
DNA (726bp) protein (242aa)
Hydrolase, TatD family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FEH2_CONWI
Hydrolase, TatD family {ECO:0000313|EMBL:ADB53664.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibacter woes
TatD family hydrolase
13_1_20cm_3_scaffold_542_24
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists


18484..19233
DNA (750bp) protein (250aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
dimethyladenosine transferase n=1 Tax=Patulibacter americanus RepID=UPI0003B5FCA5
dimethyladenosine transferase
13_1_20cm_3_scaffold_542_25
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

19230..20036
DNA (807bp) protein (269aa)
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase {ECO:0000256|HAMAP-Rule:MF_00061, ECO:0000256|SAAS:SAAS00090350}; Short=CMK {ECO:0000256|HAMAP-Rule:MF_00061};; EC=2.7.1.148 {ECO:0000256|HAMAP-Rule:M
hypothetical protein n=1 Tax=Longispora albida RepID=UPI000369D42D
ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
13_1_20cm_3_scaffold_542_26
unknown

Not on your lists

20059..20409
DNA (351bp) protein (117aa)

This feature has no annotations

13_1_20cm_3_scaffold_542_trna_1
unknown

Not on your lists

20434..20504
DNA (71bp)
transferRNA
13_1_20cm_3_scaffold_542_27
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20510..21826
DNA (1317bp) protein (439aa)
Bifunctional protein GlmU n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A7J4_THECD
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;"
UDP-N-acetylglucosamine pyrophosphorylase
13_1_20cm_3_scaffold_542_28
RBG_16_Actinobacteria_64_13_curated, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

21807..22862
DNA (1056bp) protein (352aa)
prs; ribose-phosphate pyrophosphokinase (EC:2.7.6.1); K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] Tax=RBG_16_Actinobacteria_64_13_curated
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Patulibacter americanus RepID=UPI0003B3C70E
13_1_20cm_3_scaffold_542_29
unknown

Not on your lists

comp(22859..23158)
DNA (300bp) protein (100aa)

This feature has no annotations

Displaying items 1-30 of 35 in total

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