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13_1_20cm_3_scaffold_55

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_55_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..3894)
DNA (3894bp) protein (1298aa)
ATP dependent helicase, Lhr family n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUR1_KORVE
DEAD/H associated domain protein {ECO:0000313|EMBL:AHG88940.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DEAD/H associated domain protein
13_1_20cm_3_scaffold_55_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3917..5215)
DNA (1299bp) protein (433aa)
Phospholipase D/transphosphatidylase n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E294_9GAMM
Phospholipase D-like domain protein {ECO:0000313|EMBL:AHG87996.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Phospholipase D-like domain protein
13_1_20cm_3_scaffold_55_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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5227..6078
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4Q4_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37214.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_55_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

6187..7791
DNA (1605bp) protein (535aa)
Carboxyl-terminal processing protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4Q3_GEMAT
Carboxyl-terminal protease {ECO:0000313|EMBL:AHG88001.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
carboxyl-terminal protease
13_1_20cm_3_scaffold_55_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7804..8382)
DNA (579bp) protein (193aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG88034.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_55_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

8967..9176
DNA (210bp) protein (70aa)
Cold-shock protein DNA-binding protein {ECO:0000313|EMBL:AHG88036.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cold-shock protein DNA-binding protein
Cold-shock DNA-binding domain protein id=3399190 bin=GWC2_Proteo_65_14_Ab886 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
13_1_20cm_3_scaffold_55_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

9181..10035
DNA (855bp) protein (285aa)
Probable DNA repair protein Oter_0045 n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=Y045_OPITP
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DNA repair protein
13_1_20cm_3_scaffold_55_8
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10045..12873
DNA (2829bp) protein (943aa)
DNA ligase D n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8T6U3_NIAKG rbh
DNA ligase D {ECO:0000313|EMBL:AEV97946.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niastella koreensis (strain DSM
DNA ligase D
13_1_20cm_3_scaffold_55_9
unknown

Not on your lists

comp(12880..13185)
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_3_scaffold_55_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13301..13972)
DNA (672bp) protein (224aa)
NUDIX hydrolase n=1 Tax=Clostridium sp. CAG:967 RepID=R5K8T3_9CLOT
NUDIX family hydrolase {ECO:0000313|EMBL:AHG88039.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NUDIX family hydrolase
13_1_20cm_3_scaffold_55_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14177..15967)
DNA (1791bp) protein (597aa)
Beta-N-acetylhexosaminidase {ECO:0000256|SAAS:SAAS00114579}; EC=3.2.1.52 {ECO:0000256|SAAS:SAAS00114579};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmat
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A778_GEMAT
13_1_20cm_3_scaffold_55_12
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15967..16248)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37209.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_55_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(16257..17006)
DNA (750bp) protein (250aa)
Putative fatty acid desaturase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P8_GEMAT
Fatty acid desaturase {ECO:0000313|EMBL:AHG88041.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
fatty acid desaturase
13_1_20cm_3_scaffold_55_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17226..18329
DNA (1104bp) protein (368aa)
NADP-dependent oxidoreductase domain protein {ECO:0000313|EMBL:AHG88044.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NADP-dependent oxidoreductase domain protein
Predicted protein id=4931799 bin=GWC2_Methylomirabilis_70_16 species=Physcomitrella patens genus=Physcomitrella taxon_order=Funariales taxon_class=Bryopsida phylum=Streptophyta tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_3_scaffold_55_15
unknown

Not on your lists

comp(18326..18538)
DNA (213bp) protein (71aa)

This feature has no annotations

13_1_20cm_3_scaffold_55_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18821..19312
DNA (492bp) protein (164aa)
Metallo hydrolase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XUV3_9BACT
Zn-dependent hydrolase {ECO:0000313|EMBL:AHG88047.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Zn-dependent hydrolase
13_1_20cm_3_scaffold_55_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(19806..20645)
DNA (840bp) protein (280aa)
Putative esterase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P7_GEMAT
Putative esterase {ECO:0000313|EMBL:AHG88054.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
putative esterase
13_1_20cm_3_scaffold_55_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(20652..21398)
DNA (747bp) protein (249aa)
cAMP-binding protein n=1 Tax=Deinococcus peraridilitoris (strain DSM 19664 / LMG 22246 / CIP 109416 / KR-200) RepID=L0A5C6_DEIPD
Cyclic nucleotide-binding protein {ECO:0000313|EMBL:AHG88056.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
cyclic nucleotide-binding protein
13_1_20cm_3_scaffold_55_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(21481..23583)
DNA (2103bp) protein (701aa)
Glutamate carboxypeptidase II n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P5_GEMAT
Peptidase M28 {ECO:0000313|EMBL:AHG88926.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M28
13_1_20cm_3_scaffold_55_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(23622..24053)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P4_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37204.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_55_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(24040..25617)
DNA (1578bp) protein (526aa)
Putative phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P3_GEMAT rbh
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:AHG88965.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
type I phosphodiesterase/nucleotide pyrophosphatase
Displaying 21 items

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