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13_1_20cm_3_scaffold_629

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_629_1
Roseivivax atlanticus, Roseivivax, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..553
DNA (552bp) protein (184aa)
YihY family protein n=2 Tax=Pseudomonas RepID=I4L1L5_PSEFL
Ribonuclease BN {ECO:0000313|EMBL:ETW10670.1}; TaxID=1317118 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseivivax.;" source="Roseivivax atlanticus.;"
ribonuclease, ribonuclease_BN-like family
13_1_20cm_3_scaffold_629_2
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(555..731)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6NZH7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EKP94280.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerobacter.;" source="Ther
13_1_20cm_3_scaffold_629_3
unknown

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comp(728..982)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_3_scaffold_629_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1072..2268)
DNA (1197bp) protein (399aa)
Serine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00176}; EC=6.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00176};; Seryl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00176}; Seryl-tRNA(Ser/Sec) synthetase {ECO:0000
seryl-tRNA synthetase (EC:6.1.1.11)
seryl-tRNA synthetase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFEFE1
13_1_20cm_3_scaffold_629_5
Desulfotomaculum hydrothermale, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2265..3005)
DNA (741bp) protein (247aa)
Putative hydrolase n=1 Tax=Desulfotomaculum hydrothermale Lam5 = DSM 18033 RepID=K8DY35_9FIRM
Putative hydrolase {ECO:0000313|EMBL:CCO07575.1}; TaxID=1121428 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum hydrothermale Lam
cof family hydrolase
13_1_20cm_3_scaffold_629_6
unknown

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comp(3083..4852)
DNA (1770bp) protein (590aa)

This feature has no annotations

13_1_20cm_3_scaffold_629_7
Frankia sp. EAN1pec, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

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4970..5869
DNA (900bp) protein (300aa)
Protease HtpX homolog {ECO:0000256|HAMAP-Rule:MF_00188}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_00188};; TaxID=298653 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Fra
Protease HtpX homolog n=1 Tax=Frankia sp. (strain EAN1pec) RepID=A8L5F2_FRASN
heat shock protein HtpX
13_1_20cm_3_scaffold_629_8
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

6067..6366
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4ENJ4_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF86257.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
13_1_20cm_3_scaffold_629_9
Georgenia sp. SUBG003, Georgenia, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6466..6921
DNA (456bp) protein (152aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI0003754B08
Uncharacterized protein {ECO:0000313|EMBL:KEP24300.1}; TaxID=1497974 species="Bacteria; Actinobacteria; Micrococcales; Bogoriellaceae; Georgenia.;" source="Georgenia sp. SUBG003.;"
hypothetical protein
13_1_20cm_3_scaffold_629_10
unknown

Not on your lists

6933..7106
DNA (174bp) protein (58aa)

This feature has no annotations

13_1_20cm_3_scaffold_629_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

7106..7969
DNA (864bp) protein (288aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00037C39CD
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_629_12
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

Not on your lists

7966..9285
DNA (1320bp) protein (440aa)
Major facilitator transporter n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B3T9_STRRD rbh
major facilitator transporter Tax=RBG_16_RIF_CHLX_72_14_curated
major facilitator transporter
13_1_20cm_3_scaffold_629_13
Clavibacter michiganensis, Clavibacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9285..10526
DNA (1242bp) protein (414aa)
MFS transporter n=1 Tax=Ruania albidiflava RepID=UPI0003B707BB
Uncharacterized protein {ECO:0000313|EMBL:KDP92442.1}; TaxID=1291006 species="Bacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Clavibacter.;" source="Clavibacter cf. michiganensis LMG 26808
major facilitator transporter
13_1_20cm_3_scaffold_629_14
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(10438..11202)
DNA (765bp) protein (255aa)
Phage shock protein A n=1 Tax=Patulibacter medicamentivorans RepID=H0E905_9ACTN
Phage shock protein A {ECO:0000313|EMBL:EHN09858.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Patulibacter medi
phage shock protein A, PspA
13_1_20cm_3_scaffold_629_15
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

11262..11900
DNA (639bp) protein (213aa)
Beta-lactamase domain protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3FCK9_CONWI
Beta-lactamase domain protein {ECO:0000313|EMBL:ADB49482.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="Conexibact
beta-lactamase
13_1_20cm_3_scaffold_629_16
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(11897..12934)
DNA (1038bp) protein (346aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HG47_ANADF
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
13_1_20cm_3_scaffold_629_17
unknown

Not on your lists

12976..13359
DNA (384bp) protein (128aa)

This feature has no annotations

13_1_20cm_3_scaffold_629_18
unknown

Not on your lists

comp(13361..14287)
DNA (927bp) protein (309aa)

This feature has no annotations

13_1_20cm_3_scaffold_629_19
Streptomyces tsukubaensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14679..16694)
DNA (2016bp) protein (672aa)
GAF sensor signal transduction histidine kinase n=1 Tax=Streptomyces tsukubaensis NRRL18488 RepID=I2NAS3_9ACTO
GAF sensor signal transduction histidine kinase {ECO:0000313|EMBL:EIF94120.1}; TaxID=1114943 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyce
histidine kinase,GAF domain-containing protein
Displaying 19 items

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