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13_1_20cm_3_scaffold_662

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_662_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..675)
DNA (675bp) protein (225aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A975_GEMAT
MotA/TolQ/ExbB proton channel {ECO:0000313|EMBL:AHG91154.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
MotA/TolQ/ExbB proton channel
13_1_20cm_3_scaffold_662_2
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(698..1405)
DNA (708bp) protein (236aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
TonB family protein {ECO:0000313|EMBL:AHG91155.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB family protein
13_1_20cm_3_scaffold_662_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1510..2190)
DNA (681bp) protein (227aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
TonB family protein {ECO:0000313|EMBL:AHG91155.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
TonB family protein
13_1_20cm_3_scaffold_662_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2309..3766)
DNA (1458bp) protein (486aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A977_GEMAT
ATP-binding region ATPase domain protein
13_1_20cm_3_scaffold_662_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(3773..4465)
DNA (693bp) protein (231aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A978_GEMAT
Transcriptional regulator domain-containing protein {ECO:0000313|EMBL:AHG91157.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
transcriptional regulator domain-containing protein
13_1_20cm_3_scaffold_662_6
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(4616..5500)
DNA (885bp) protein (295aa)
lipoprotein Tax=RBG_13_Bacteroidetes_42_15_curated
13_1_20cm_3_scaffold_662_7
unknown

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comp(5688..6545)
DNA (858bp) protein (286aa)

This feature has no annotations

13_1_20cm_3_scaffold_662_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(6542..7660)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Z1_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG92075.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_3_scaffold_662_9
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(7747..8124)
DNA (378bp) protein (126aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEL4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_3_scaffold_662_10
unknown

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8372..8626
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_20cm_3_scaffold_662_11
unknown

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8636..8941
DNA (306bp) protein (102aa)

This feature has no annotations

13_1_20cm_3_scaffold_662_12
unknown

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comp(9031..9447)
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_20cm_3_scaffold_662_13

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comp(9447..10436)
DNA (990bp) protein (330aa)
Uncharacterized protein {ECO:0000313|EMBL:KKN34531.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_3_scaffold_662_14
unknown

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comp(10442..11311)
DNA (870bp) protein (290aa)

This feature has no annotations

13_1_20cm_3_scaffold_662_15
unknown

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comp(11332..11790)
DNA (459bp) protein (153aa)

This feature has no annotations

13_1_20cm_3_scaffold_662_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(11787..12260)
DNA (474bp) protein (158aa)
Type IV fimbrial biogenesis protein FimT n=2 Tax=Acinetobacter indicus RepID=S3NEU3_9GAMM
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_3_scaffold_662_17
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12421..12900)
DNA (480bp) protein (160aa)
Putative thiol-specific antioxidant protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A982_GEMAT
Putative thiol-specific antioxidant protein {ECO:0000313|EMBL:BAH39059.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas a
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
13_1_20cm_3_scaffold_662_18
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12929..13393
DNA (465bp) protein (155aa)
thioredoxin n=1 Tax=Methylobacter marinus RepID=UPI00037410E4
Thioredoxin {ECO:0000313|EMBL:AHG91162.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
thioredoxin
13_1_20cm_3_scaffold_662_19
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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comp(13409..13804)
DNA (396bp) protein (132aa)
signal transduction histidine kinase, nitrogen specific, NtrB Tax=GWC2_RIF_CHLX_73_18_curated
PAS/PAC sensor hybrid histidine kinase id=4822538 bin=GWC2_Chloroflexi_73_18 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
periplasmic sensor hybrid histidine kinase
13_1_20cm_3_scaffold_662_20
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

14145..14750
DNA (606bp) protein (202aa)
NtrC family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5W0_GEMAT
NtrC family two-component response regulator {ECO:0000313|EMBL:BAH37620.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas
NtrC family two-component response regulator
Displaying 20 items

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