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13_1_20cm_3_scaffold_816

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_816_1
R_Acidobacteria_61_28, Acidobacteria, Bacteria

Not on your lists

comp(1..585)
DNA (585bp) protein (195aa)
tRNA modification GTPase TrmE; K03650 tRNA modification GTPase [EC:3.6.-.-] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_61_28_curated
tRNA modification GTPase MnmE n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F9M5_ACIC5
trmE; tRNA modification GTPase TrmE
13_1_20cm_3_scaffold_816_2
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

688..1224
DNA (537bp) protein (179aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ABF43702.1}; EC=2.5.1.17 {ECO:0000313|EMBL:ABF43702.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacte
Cob(I)yrinic acid a,c-diamide adenosyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHE8_KORVE
cob(I)yrinic acid a,c-diamide adenosyltransferase
13_1_20cm_3_scaffold_816_3
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

1331..2182
DNA (852bp) protein (284aa)
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHE9_KORVE rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha rbh
13_1_20cm_3_scaffold_816_4
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

2355..3107
DNA (753bp) protein (251aa)
FolC bifunctional protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVH6_KORVE
FolC bifunctional protein {ECO:0000313|EMBL:ABF39124.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (str
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
13_1_20cm_3_scaffold_816_5
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3071..3652
DNA (582bp) protein (194aa)
FolC bifunctional protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVH6_KORVE
FolC bifunctional protein {ECO:0000313|EMBL:ABF39124.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (str
bifunctional folylpolyglutamate synthase/dihydrofolate synthase
13_1_20cm_3_scaffold_816_6
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

3642..4502
DNA (861bp) protein (287aa)
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000256|RuleBase:RU361267}; EC=2.3.1.51 {ECO:0000256|RuleBase:RU361267};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobact
1-acyl-sn-glycerol-3-phosphate acyltransferase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVH5_KORVE
1-acyl-sn-glycerol-3-phosphate acyltransferase
13_1_20cm_3_scaffold_816_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(4582..4863)
DNA (282bp) protein (94aa)
Histone-like DNA-binding protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHE6_KORVE
Histone-like DNA-binding protein {ECO:0000313|EMBL:ABF43704.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatil
histone-like DNA-binding protein
13_1_20cm_3_scaffold_816_8
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(5075..6415)
DNA (1341bp) protein (447aa)
Isocitrate lyase {ECO:0000313|EMBL:ABF43706.1}; EC=4.1.3.1 {ECO:0000313|EMBL:ABF43706.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;"
Isocitrate lyase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHE4_KORVE rbh
isocitrate lyase
13_1_20cm_3_scaffold_816_9
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(6521..8092)
DNA (1572bp) protein (524aa)
Malate synthase {ECO:0000313|EMBL:ABF43707.1}; EC=2.3.3.9 {ECO:0000313|EMBL:ABF43707.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" s
Malate synthase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IHE3_KORVE rbh
malate synthase
13_1_20cm_3_scaffold_816_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8367..9323
DNA (957bp) protein (319aa)
LysR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
LysR family transcriptional regulator id=3087830 bin=GWC2_Methylomirabilis_70_16 species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Transcriptional regulator
13_1_20cm_3_scaffold_816_11
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

9492..10253
DNA (762bp) protein (254aa)
DNA replication protein, DNAC-like protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IVN5_KORVE rbh
DNA replication protein, DNAC-like protein {ECO:0000313|EMBL:ABF39065.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
DNA replication protein, DNAC-like
13_1_20cm_3_scaffold_816_12
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(10262..11296)
DNA (1035bp) protein (345aa)
Outer membrane transport energization protein TonB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILW6_KORVE
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:ABF42134.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="K
TonB-like protein
13_1_20cm_3_scaffold_816_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(11293..11820)
DNA (528bp) protein (176aa)
Sigma-24, ECF subfamily n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILW7_KORVE
Sigma-24, ECF subfamily {ECO:0000313|EMBL:ABF42133.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strai
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_3_scaffold_816_14
Janthinobacterium agaricidamnosum, Janthinobacterium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12017..12559)
DNA (543bp) protein (181aa)
diguanylate cyclase n=1 Tax=Ideonella sp. B508-1 RepID=UPI0003B55229
Diguanylate cyclase domain protein {ECO:0000313|EMBL:CDG80983.1}; TaxID=1349767 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Janthinobacterium.;" source="J
diguanylate cyclase domain protein
13_1_20cm_3_scaffold_816_15
unknown

Not on your lists

comp(12556..12894)
DNA (339bp) protein (113aa)

This feature has no annotations

13_1_20cm_3_scaffold_816_16
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(13142..14296)
DNA (1155bp) protein (385aa)
Putative peptidase family T4 n=1 Tax=uncultured marine microorganism HF4000_001A02 RepID=B3SZY2_9ZZZZ
aminopeptidase DmpA Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
aminopeptidase DmpA
13_1_20cm_3_scaffold_816_17
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

14415..14696
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQP5_KORVE
Uncharacterized protein {ECO:0000313|EMBL:ABF40805.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
hypothetical protein
13_1_20cm_3_scaffold_816_18
R_Acidobacteria_67_28, Acidobacteria, Bacteria

Not on your lists

comp(14838..15314)
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A192_PELCD
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Acidobacteria_67_28_curated
hypothetical protein
13_1_20cm_3_scaffold_816_19
unknown

Not on your lists

comp(15429..15629)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_3_scaffold_816_20
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

15819..17030
DNA (1212bp) protein (404aa)
peptidase M24 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B78BDE
Peptidase M24 {ECO:0000313|EMBL:ABF42290.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (strain Ellin345
peptidase M24
13_1_20cm_3_scaffold_816_21
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17141..17641
DNA (501bp) protein (167aa)
Biotin carboxyl carrier protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILG1_KORVE
Biotin carboxyl carrier protein {ECO:0000313|EMBL:ABF42289.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatili
biotin carboxyl carrier protein
13_1_20cm_3_scaffold_816_22
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

17751..19124
DNA (1374bp) protein (458aa)
Acetyl-CoA carboxylase, biotin carboxylase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1ILG2_KORVE
Acetyl-CoA carboxylase, biotin carboxylase {ECO:0000313|EMBL:ABF42288.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacte
acetyl-CoA carboxylase, biotin carboxylase
13_1_20cm_3_scaffold_816_23
unknown

Not on your lists

comp(19177..19344)
DNA (168bp) protein (56aa)

This feature has no annotations

13_1_20cm_3_scaffold_816_24
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

20562..21599
DNA (1038bp) protein (346aa)
Outer membrane transport energization protein TonB n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IPU8_KORVE
Outer membrane transport energization protein TonB {ECO:0000313|EMBL:ABF41102.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="K
TonB-like protein
13_1_20cm_3_scaffold_816_25
Rhodopirellula europaea, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21717..22223
DNA (507bp) protein (169aa)
Signal peptide protein n=1 Tax=Rhodopirellula europaea 6C RepID=M2AMA0_9PLAN
Signal peptide protein {ECO:0000313|EMBL:EMB13832.1}; TaxID=1263867 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Rhodopirellula.;" source="Rhodopirellula eur
hypothetical protein
Displaying 25 items

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