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13_1_20cm_3_scaffold_860

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_860_1
Streptomyces sp. C, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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47..1009
DNA (963bp) protein (321aa)
3-oxoacyl-ACP synthase I n=1 Tax=Streptomyces sp. C RepID=D9W2A3_9ACTO
3-oxoacyl-ACP synthase I {ECO:0000313|EMBL:EFL18159.1}; TaxID=253839 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces sp. C.;"
beta-ketoacyl synthase
13_1_20cm_3_scaffold_860_2
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

975..1673
DNA (699bp) protein (233aa)
enoyl-CoA hydratase/isomerase (EC:4.2.1.55); K01715 3-hydroxybutyryl-CoA dehydratase [EC:4.2.1.55] Tax=GWC2_Rokubacteria_70_16_curated
Enoyl-CoA hydratase/isomerase id=4797652 bin=GWC2_Methylomirabilis_70_16 species=Syntrophothermus lipocalidus genus=Syntrophothermus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
enoyl-CoA hydratase/carnithine racemase
13_1_20cm_3_scaffold_860_3
RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1724..2818
DNA (1095bp) protein (365aa)
6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase n=1 Tax=delta proteobacterium NaphS2 RepID=D8EZY5_9DELT rbh
had; 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase Had Tax=RBG_19FT_COMBO_Deltaproteobacteria_46_12_curated
6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase
13_1_20cm_3_scaffold_860_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2836..3771
DNA (936bp) protein (312aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5L3_GEMAT
putative oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Alcohol dehydrogenase zinc-binding domain protein
13_1_20cm_3_scaffold_860_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3828..5066
DNA (1239bp) protein (413aa)
fabF; beta-ketoacyl synthase (EC:2.3.1.179) Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
fabF; beta-ketoacyl synthase (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AC81_9PROT rbh
13_1_20cm_3_scaffold_860_6
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

5133..6266
DNA (1134bp) protein (378aa)
anti-sigma-factor antagonist Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Anti-sigma-factor antagonist id=4337253 bin=GWC2_Ignavibacteria_56_12 species=Conexibacter woesei genus=Conexibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
anti-sigma-factor antagonist
13_1_20cm_3_scaffold_860_7
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated, Betaproteobacteria, Proteobacteria, Bacteria

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6268..6900
DNA (633bp) protein (211aa)
two component LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13_curated
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10
LuxR family response regulator
13_1_20cm_3_scaffold_860_8
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6920..8401)
DNA (1482bp) protein (494aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI0003703C38 rbh
Uncharacterized protein {ECO:0000313|EMBL:ABC82710.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; An
hypothetical protein
13_1_20cm_3_scaffold_860_9
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

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comp(8443..9051)
DNA (609bp) protein (203aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q020R0_SOLUE
Uncharacterized protein {ECO:0000313|EMBL:ABJ84584.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source=
hypothetical protein
13_1_20cm_3_scaffold_860_10
Pseudomonas sp. GM24, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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9252..9524
DNA (273bp) protein (91aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI00036F3C9B
Uncharacterized protein {ECO:0000313|EMBL:EJM30203.1}; TaxID=1144326 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. G
hypothetical protein
13_1_20cm_3_scaffold_860_11
RLO_PLX_64_10, Bacteria

Not on your lists

comp(9517..12054)
DNA (2538bp) protein (846aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003736430 rbh
Predicted ATPase Tax=RIFCSPLOWO2_12_FULL_PLX_64_10_curated
XRE family transcriptional regulator
13_1_20cm_3_scaffold_860_12
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

12395..13537
DNA (1143bp) protein (381aa)
Acyl-CoA dehydrogenase n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9F7V9_9CYAN rbh
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EKU99202.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp. PCC 7375.;"
acyl-CoA dehydrogenase domain-containing protein
13_1_20cm_3_scaffold_860_13
Cardiobacterium valvarum, Cardiobacterium, Cardiobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13559..14155)
DNA (597bp) protein (199aa)
ribE_[H]; Riboflavin synthase alpha chain (EC:2.5.1.9)
Riboflavin synthase, alpha subunit n=1 Tax=Cardiobacterium valvarum F0432 RepID=G9ZCK0_9GAMM
Riboflavin synthase, alpha subunit {ECO:0000313|EMBL:EHM55731.1}; TaxID=797473 species="Bacteria; Proteobacteria; Gammaproteobacteria; Cardiobacteriales; Cardiobacteriaceae; Cardiobacterium.;" source=
13_1_20cm_3_scaffold_860_14
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14172..15305)
DNA (1134bp) protein (378aa)
ribD; diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
diaminohydroxyphosphoribosylaminopyrimidine deaminase n=1 Tax=Thioalkalivibrio thiocyanodenitrificans RepID=UPI000360A7B2
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Can
13_1_20cm_3_scaffold_860_15

Not on your lists

comp(15318..15908)
DNA (591bp) protein (197aa)
Ribonucleotide reductase regulator NrdR-like protein n=1 Tax=mine drainage metagenome RepID=T1CBW7_9ZZZZ
Ribonucleotide reductase regulator NrdR-like protein {ECO:0000313|EMBL:EQD79762.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenom
nrdR; transcriptional regulator NrdR
13_1_20cm_3_scaffold_860_16
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15918..17174)
DNA (1257bp) protein (419aa)
glyA; serine hydroxymethyltransferase (EC:2.1.2.1)
serine hydroxymethyltransferase n=1 Tax=Arhodomonas aquaeolei RepID=UPI000360360F rbh
glyA; glycine hydroxymethyltransferase Tax=RBG_16_Gammaproteobacteria_62_13__curated
13_1_20cm_3_scaffold_860_17
RBG_16_Gamma2_65_34_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17268..18011)
DNA (744bp) protein (248aa)
Histone deacetylase superfamily n=2 Tax=Nitrosococcus oceani RepID=Q3JCH3_NITOC
histone deacetylase; K04768 acetoin utilization protein AcuC Tax=RBG_16_Gamma2_65_34_curated
histone deacetylase superfamily protein
Displaying 17 items

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