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13_1_20cm_3_scaffold_905

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_905_1
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(1..501)
DNA (501bp) protein (167aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A875_GEMAT
peptidase M41 FtsH domain protein
13_1_20cm_3_scaffold_905_2
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(501..1067)
DNA (567bp) protein (189aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:BAH38434.1}; EC=2.4.2.8 {ECO:0000313|EMBL:BAH38434.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae;
hpt; hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
Hypoxanthine phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A874_GEMAT
13_1_20cm_3_scaffold_905_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(1064..2050)
DNA (987bp) protein (329aa)
tRNA(Ile)-lysidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; EC=6.3.4.19 {ECO:0000256|HAMAP-Rule:MF_01161};; tRNA(Ile)-2-lysyl-cytidine synthase {ECO:0000256|HAMAP-Rule:MF_01161}; tRNA(Ile)-lysidine
tRNA(Ile)-lysidine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=TILS_GEMAT
tRNA(Ile)-lysidine synthase
13_1_20cm_3_scaffold_905_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2088..2294
DNA (207bp) protein (69aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG90576.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_3_scaffold_905_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(2282..4174)
DNA (1893bp) protein (631aa)
Uncharacterized protein {ECO:0000313|EMBL:AHG88592.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
Transglycosylase SLT domain-containing protein id=4762292 bin=GWC2_Methylomirabilis_70_24 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_3_scaffold_905_6
uncultured Acidobacteria bacterium, Acidobacteria, Bacteria

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comp(4264..5838)
DNA (1575bp) protein (525aa)
Glucose-6-phosphate 1-dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0000256|RuleBase:RU000497}; Short=G6PD {ECO:0000256|HAMAP-Rule:MF_00966};; EC=1.1.1.49 {ECO:0000256|HAMAP-Rule:MF_00966, ECO:0
glucose-6-phosphate 1-dehydrogenase (EC:1.1.1.49)
Glucose-6-phosphate 1-dehydrogenase n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SG45_9BACT
13_1_20cm_3_scaffold_905_7
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(5835..6734)
DNA (900bp) protein (300aa)
6-phosphogluconate dehydrogenase, decarboxylating n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C7X9_SPHTD
6-phosphogluconate dehydrogenase, decarboxylating {ECO:0000313|EMBL:ACZ39850.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacterace
6-phosphogluconate dehydrogenase
13_1_20cm_3_scaffold_905_8
Deinococcus geothermalis, Deinococcus, Deinococcales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(6739..7362)
DNA (624bp) protein (208aa)
HAD-superfamily hydrolase subfamily IA, variant 3 n=1 Tax=Deinococcus geothermalis (strain DSM 11300) RepID=Q1IXS2_DEIGD
HAD-superfamily hydrolase subfamily IA, variant 3 {ECO:0000313|EMBL:ABF45962.1}; TaxID=319795 species="Bacteria; Deinococcus-Thermus; Deinococci; Deinococcales; Deinococcaceae; Deinococcus.;" source="
HAD family hydrolase
13_1_20cm_3_scaffold_905_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(7359..7988)
DNA (630bp) protein (210aa)
Kynurenine formamidase {ECO:0000313|EMBL:CDM64258.1}; EC=3.5.1.9 {ECO:0000313|EMBL:CDM64258.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyri
Cyclase family protein n=1 Tax=Geobacter sp. (strain M21) RepID=C6E690_GEOSM
cyclase family protein
13_1_20cm_3_scaffold_905_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8020..8433)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9I4_GEMAT
ApaG domain protein {ECO:0000313|EMBL:AHG91235.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
ApaG domain protein
13_1_20cm_3_scaffold_905_11
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(8613..10649)
DNA (2037bp) protein (679aa)
Putative metalloendopeptidase n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KTI8_SOLCM rbh
Peptidase M13 {ECO:0000313|EMBL:AHG87717.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M13
13_1_20cm_3_scaffold_905_12
RBG_19FT_COMBO_Chloroflexi_62_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(10796..11362)
DNA (567bp) protein (189aa)
Histone-lysine N-methyltransferase, H3 lysine-4 specific n=2 Tax=Stigmatella aurantiaca DW4/3-1 RepID=Q092R0_STIAD id=1245131 bin=RBG9 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG9 organism_group=Chloroflexi
set domain-containing protein; K07117 Tax=RBG_19FT_COMBO_Chloroflexi_62_14_curated
set domain-containing protein
13_1_20cm_3_scaffold_905_13
Pleurocapsa minor, Pleurocapsa, Pleurocapsales, Cyanobacteria, Bacteria

Not on your lists

comp(11384..12706)
DNA (1323bp) protein (441aa)
Fumarylacetoacetate hydrolase {ECO:0000313|EMBL:AFY75881.1}; EC=3.7.1.2 {ECO:0000313|EMBL:AFY75881.1};; TaxID=118163 species="Bacteria; Cyanobacteria; Pleurocapsales; Pleurocapsa.;" source="Pleurocaps
fumarylacetoacetate hydrolase (EC:3.7.1.2)
hypothetical protein n=1 Tax=cyanobacterium PCC 7702 RepID=UPI00037E5E1A rbh
13_1_20cm_3_scaffold_905_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(12703..13623)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5G9_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37479.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_3_scaffold_905_15
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13625..13897)
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZC1_CONWI
Uncharacterized protein {ECO:0000313|EMBL:ETK37391.1}; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangiaceae; Microbispora.;" source="Microbispora sp. ATCC PTA-5024
hypothetical protein
13_1_20cm_3_scaffold_905_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13991..15886)
DNA (1896bp) protein (632aa)
Chloride channel n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CFV6_MYXFH
Cl-channel voltage-gated family protein {ECO:0000313|EMBL:AHG87829.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Cl-channel voltage-gated family protein
13_1_20cm_3_scaffold_905_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(15958..16218)
DNA (261bp) protein (87aa)
Transglycosylase n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U4Y0_MYXSD
Transglycosylase-associated protein {ECO:0000313|EMBL:AHG91953.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Transglycosylase-associated protein
13_1_20cm_3_scaffold_905_18
unknown

Not on your lists

comp(16344..16781)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_20cm_3_scaffold_905_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(17200..18321)
DNA (1122bp) protein (374aa)
Putative uncharacterized protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IED4_9CHLR rbh
Uncharacterized protein {ECO:0000313|EMBL:AHG91273.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156
13_1_20cm_3_scaffold_905_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

18480..19310
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA65_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_3_scaffold_905_21
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

19383..20714
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y0M5_SORCE
signal transduction histidine kinase LytS Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
hypothetical protein
13_1_20cm_3_scaffold_905_22
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

20714..21487
DNA (774bp) protein (258aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00036C0DEF
DNA-binding response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
LytR/AlgR family transcriptional regulator
13_1_20cm_3_scaffold_905_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(21522..23399)
DNA (1878bp) protein (626aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
UPF0182 protein DAMO_1249 id=2534586 bin=GWC2_CP_Nitrospirae-rel_42_7 species=ACD50 genus=ACD50 taxon_order=ACD50 taxon_class=ACD50 phylum=OP11 tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
hypothetical protein
Displaying 23 items

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