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13_1_20cm_3_scaffold_97

Search features with annotation key words

Displaying items 1-30 of 73 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_3_scaffold_97_1
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(1..363)
DNA (363bp) protein (121aa)
GtrA family protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3W2_CONWI
GtrA family protein Tax=RBG_16_Actinobacteria_68_12_curated
GtrA family protein
13_1_20cm_3_scaffold_97_2
unknown

Not on your lists

comp(386..817)
DNA (432bp) protein (144aa)

This feature has no annotations

13_1_20cm_3_scaffold_97_3
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(847..1494)
DNA (648bp) protein (216aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77); K00573 protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77] Tax=RBG_16_Actinobacteria_68_12_curated
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase id=4803508 bin=GWC2_Chloroflexi_73_18 species=Methanolinea tarda genus=Methanolinea taxon_order=Methanomicrobiales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
13_1_20cm_3_scaffold_97_4
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(1466..2809)
DNA (1344bp) protein (448aa)
Type I phosphodiesterase/nucleotide pyrophosphatase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F3W3_CONWI
Type I phosphodiesterase/nucleotide pyrophosphatase {ECO:0000313|EMBL:ADB54338.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter
type I phosphodiesterase/nucleotide pyrophosphatase
13_1_20cm_3_scaffold_97_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(2796..3215)
DNA (420bp) protein (140aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_3_scaffold_97_6
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3302..3634
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Prochlorothrix hollandica RepID=UPI00034AEEF5
Thioredoxin {ECO:0000256|PIRNR:PIRNR000077}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
thioredoxin
13_1_20cm_3_scaffold_97_7
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3737..4285
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Methylohalobius crimeensis RepID=UPI0003B33A6A
Uncharacterized protein {ECO:0000313|EMBL:CEL16152.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
13_1_20cm_3_scaffold_97_8
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(4299..5339)
DNA (1041bp) protein (347aa)
catalytic domain of components of various dehydrogenase complexes; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RBG_16_Actinobacteria_68_12_curated
Catalytic domain of components of various dehydrogenase complexes n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5F1_CONWI
catalytic domain of components of various dehydrogenase complexes
13_1_20cm_3_scaffold_97_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

comp(5339..6205)
DNA (867bp) protein (289aa)
Acetamidase/Formamidase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TR17_9CHLR
Acetamidase/Formamidase {ECO:0000313|EMBL:EFH85888.1}; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonobacterales; Ktedonobacteraceae; Ktedonobacter.;" source="Ktedonobacter racem
acetamidase/Formamidase
13_1_20cm_3_scaffold_97_10
unknown

Not on your lists

comp(6202..6609)
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_20cm_3_scaffold_97_11
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(6611..7582)
DNA (972bp) protein (324aa)
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_16_Actinobacteria_68_12_curated
Transketolase central region n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5F0_CONWI
transketolase
13_1_20cm_3_scaffold_97_12
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(7575..8639)
DNA (1065bp) protein (355aa)
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] Tax=RBG_16_Actinobacteria_68_12_curated
3-methyl-2-oxobutanoate dehydrogenase (EC:1.2.4.4)
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5E9_CONWI
13_1_20cm_3_scaffold_97_13
Methanoculleus marisnigri, Methanoculleus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8652..9485)
DNA (834bp) protein (278aa)
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=A3CV56_METMJ
Dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein {ECO:0000313|EMBL:ABN57256.1}; TaxID=368407 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae;
dipeptidyl aminopeptidases/acylaminoacyl-peptidases-like protein
13_1_20cm_3_scaffold_97_14
Nocardiopsis dassonvillei, Nocardiopsis, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9482..9958)
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI000370A278
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:ADH70947.1}; TaxID=446468 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Nocardiopsis.;" source="Nocardiopsis da
transcriptional regulator, PadR-like family
13_1_20cm_3_scaffold_97_15
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(10017..10904)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Rhodococcus triatomae BKS 15-14 RepID=M2WTD2_9NOCA
hypothetical protein; K07029 Tax=RBG_16_Actinobacteria_68_12_curated
DeoR faimly transcriptional regulator
13_1_20cm_3_scaffold_97_16
unknown

Not on your lists

10916..11251
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_20cm_3_scaffold_97_17
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(11233..11808)
DNA (576bp) protein (192aa)
Transcriptional regulator, TetR family n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F5F3_CONWI
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ADB50620.1}; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibacteraceae; Conexibacter.;" source="C
TetR family transcriptional regulator
13_1_20cm_3_scaffold_97_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

11843..12742
DNA (900bp) protein (300aa)
phenylacetate-CoA oxygenase, PaaG subunit; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] Tax=RBG_16_Actinobacteria_68_12_curated
Phenylacetate-CoA oxygenase, PaaG subunit n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NLK2_MARHT
phenylacetate-CoA oxygenase subunit PaaG
13_1_20cm_3_scaffold_97_19
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

12748..13038
DNA (291bp) protein (97aa)
Phenylacetic acid degradation B n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C840_SPHTD
Phenylacetic acid degradation B {ECO:0000313|EMBL:ACZ39983.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.
phenylacetic acid degradation B
13_1_20cm_3_scaffold_97_20
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

12998..13576
DNA (579bp) protein (193aa)
phenylacetate-CoA oxygenase, PaaI subunit; K02611 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC [EC:1.14.13.149] Tax=RBG_16_RIF_CHLX_70_13_curated
Phenylacetate-CoA oxygenase, PaaI subunit n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C841_SPHTD
phenylacetate-CoA oxygenase, PaaI subunit
13_1_20cm_3_scaffold_97_21
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

13570..14055
DNA (486bp) protein (162aa)
Phenylacetic acid degradation protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67LH8_SYMTH
phenylacetate-CoA oxygenase, PaaJ subunit; K02612 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD Tax=RBG_16_Actinobacteria_68_12_curated
paaD; phenylacetic acid degradation protein
13_1_20cm_3_scaffold_97_22
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

comp(14052..14948)
DNA (897bp) protein (299aa)
TGS domain protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6R3_ANADF
TGS domain-containing protein; K06944 Tax=RBG_16_RIF_CHLX_70_13_curated
TGS domain-containing protein
13_1_20cm_3_scaffold_97_23
unknown

Not on your lists

15133..15765
DNA (633bp) protein (211aa)

This feature has no annotations

13_1_20cm_3_scaffold_97_24
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15795..16343
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Salinispora RepID=UPI0003698FCB
Uncharacterized protein {ECO:0000313|EMBL:KFE63274.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalangium.;" source="Hyal
hypothetical protein
13_1_20cm_3_scaffold_97_25
Streptomyces ipomoeae, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16270..17094)
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1L848_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EKX68778.1}; TaxID=698759 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces ipomoeae 91-03.;"
arylesterase-like protein
13_1_20cm_3_scaffold_97_26
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(17138..18457)
DNA (1320bp) protein (440aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae
Artificial two-component regulatory system sensor kinase n=1 Tax=Patulibacter medicamentivorans RepID=H0E3K2_9ACTN
integral membrane sensor signal transduction histidine kinase
13_1_20cm_3_scaffold_97_27
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

Not on your lists

comp(18454..19110)
DNA (657bp) protein (219aa)
DNA-binding response regulator TcrA n=1 Tax=Patulibacter medicamentivorans RepID=H0E3K5_9ACTN
DNA-binding response regulator TcrA {ECO:0000313|EMBL:EHN11756.1}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Patulibacteraceae; Patulibacter.;" source="Pat
two component transcriptional regulator
13_1_20cm_3_scaffold_97_28
unknown

Not on your lists

19225..19629
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_20cm_3_scaffold_97_29
Methanosarcina sp. 2.H.T.1A.15, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

19682..20134
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:KKG10748.1}; TaxID=1483596 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
Putative uncharacterized protein id=4649496 bin=GWC2_Chloroflexi_73_18 species=Arthrobacter globiformis genus=Arthrobacter taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
hypothetical protein
13_1_20cm_3_scaffold_97_30
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(20305..20832)
DNA (528bp) protein (176aa)
hypothetical protein n=1 Tax=Patulibacter americanus RepID=UPI0003B56B2D
putative transmembrane protein Tax=RBG_16_Actinobacteria_68_12_curated
hypothetical protein
Displaying items 1-30 of 73 in total

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