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13_1_20cm_4_scaffold_1191

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1191_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..750)
DNA (750bp) protein (250aa)
Putative biopolymer transport protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A975_GEMAT
putative biopolymer transport protein; K03562 biopolymer transport protein TolQ Tax=RBG_16_Gemmatimonadetes_66_8_curated
MotA/TolQ/ExbB proton channel
13_1_20cm_4_scaffold_1191_2
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(772..1449)
DNA (678bp) protein (226aa)
Putative TonB protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A976_GEMAT
tonB; putative TonB protein; K03832 periplasmic protein TonB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
tonB; putative TonB protein
13_1_20cm_4_scaffold_1191_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(1597..3054)
DNA (1458bp) protein (486aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A977_GEMAT
two-component histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
two-component histidine kinase
13_1_20cm_4_scaffold_1191_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3056..3724)
DNA (669bp) protein (223aa)
OmpR family two-component response regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A978_GEMAT
OmpR family two-component response regulator; K07665 two-component system, OmpR family, copper resistance phosphate regulon response regulator CusR Tax=GWC2_Gemmatimonadetes_71_10_curated
transcriptional regulator domain-containing protein
13_1_20cm_4_scaffold_1191_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3721..5277)
DNA (1557bp) protein (519aa)
Two-component histidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A980_GEMAT
two-component histidine kinase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PAS sensor protein
13_1_20cm_4_scaffold_1191_6
unknown

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comp(5288..5848)
DNA (561bp) protein (187aa)

This feature has no annotations

13_1_20cm_4_scaffold_1191_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6427..8466
DNA (2040bp) protein (680aa)
Alpha-galactosidase-like protein; K07407 alpha-galactosidase [EC:3.2.1.22] Tax=GWC2_Gemmatimonadetes_71_10_curated
alpha-galactosidase n=1 Tax=Haladaptatus paucihalophilus RepID=UPI00035ED4C8
alpha-galactosidase-like protein
13_1_20cm_4_scaffold_1191_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(8553..9386)
DNA (834bp) protein (278aa)
binding-protein-dependent transporters inner membrane component; K02026 multiple sugar transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
ABC-type sugar transport system, permease component id=4522148 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
proteophosphoglycan ppg4
13_1_20cm_4_scaffold_1191_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9379..11202)
DNA (1824bp) protein (608aa)
binding-protein-dependent transporters inner membrane component; K02025 multiple sugar transport system permease protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Permease component of ABC-type sugar transporter id=4522138 bin=GWC2_Ignavibacteria_56_12 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
binding-protein-dependent transport systems inner membrane component
13_1_20cm_4_scaffold_1191_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(11199..12479)
DNA (1281bp) protein (427aa)
putative ABC transporter substrate binding protein; K02027 multiple sugar transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Permease component of ABC-type sugar transporter id=4214564 bin=GWA2_Ignavibacteria_55_11 species=RAAC39 genus=RAAC39 taxon_order=RAAC39 taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Extracellular solute-binding protein family 1
13_1_20cm_4_scaffold_1191_11
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12476..13546)
DNA (1071bp) protein (357aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC {ECO:0000255|HAMAP-Rule:MF_01727}; EC=3.6.3.20 {ECO:0000255|HAMAP-Rule:MF_01727};; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobac
sn-glycerol-3-phosphate import ATP-binding protein UgpC n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=UGPC_CUPPJ
ugpC; glycerol-3-phosphate transporter ATP-binding subunit
13_1_20cm_4_scaffold_1191_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13567..14043)
DNA (477bp) protein (159aa)
Putative thiol-specific antioxidant protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A982_GEMAT
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen {ECO:0000313|EMBL:AHG91160.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
13_1_20cm_4_scaffold_1191_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14233..14907
DNA (675bp) protein (225aa)
sodA; Superoxide dismutase; K04564 superoxide dismutase, Fe-Mn family [EC:1.15.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Superoxide dismutase (EC:1.15.1.1)
superoxide dismutase n=1 Tax=Alicyclobacillus pohliae RepID=UPI0003614830
13_1_20cm_4_scaffold_1191_14
unknown

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comp(14960..15628)
DNA (669bp) protein (223aa)

This feature has no annotations

13_1_20cm_4_scaffold_1191_15
R_Betaproteobacteria_64_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15567..16349)
DNA (783bp) protein (261aa)
histidinol-phosphate phosphatase (EC:3.1.3.15); K05602 histidinol-phosphatase [EC:3.1.3.15] Tax=RIFCSPLOWO2_02_Betaproteobacteria_64_14_curated
Histidinol-phosphate phosphatase n=1 Tax=Frankia sp. CN3 RepID=G6HHN8_9ACTO
histidinol-phosphate phosphatase
13_1_20cm_4_scaffold_1191_16
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

comp(16354..16929)
DNA (576bp) protein (192aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
methionine-R-sulfoxide reductase (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NNH2_ROSCS
13_1_20cm_4_scaffold_1191_trna_1
unknown

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comp(16950..17022)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_1191_17
Thermus thermophilus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

17217..18011
DNA (795bp) protein (265aa)
ABC-type tungstate transport system, permease component n=1 Tax=Thermus thermophilus JL-18 RepID=H9ZTH8_THETH
ABC-type tungstate transport system, permease component {ECO:0000313|EMBL:AFH39638.1}; Flags: Precursor;; TaxID=798128 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermu
ABC-type tungstate transport system permease
13_1_20cm_4_scaffold_1191_18
unknown

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comp(18027..18428)
DNA (402bp) protein (134aa)

This feature has no annotations

13_1_20cm_4_scaffold_1191_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18425..20518)
DNA (2094bp) protein (698aa)
secreted metalloprotease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative protease id=4844599 bin=GWC2_CP_Nitrospirae-rel_42_7 species=Hydrogenivirga sp. 128-5-R1-1 genus=Hydrogenivirga taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWC2_CP_Nitrospirae-rel_42_7 organism_group=Nitrospirae
putative protease
13_1_20cm_4_scaffold_1191_20
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(20565..21503)
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036E062A
amino acid permease-associated protein Tax=GWC2_Gemmatimonadetes_71_10_curated
amino acid permease-associated protein
Displaying 21 items

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