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13_1_20cm_4_scaffold_1214

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1214_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(3..1421)
DNA (1419bp) protein (473aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003726D78
NADH-ubiquinone oxidoreductase chain L Tax=RBG_16_Euryarchaeota_68_13_curated
NADH-ubiquinone oxidoreductase chain L
13_1_20cm_4_scaffold_1214_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(1425..1727)
DNA (303bp) protein (101aa)
F420H2 dehydrogenase subunit K; K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000368E3B2
F420H2 dehydrogenase subunit K
13_1_20cm_4_scaffold_1214_3
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(1724..1993)
DNA (270bp) protein (90aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1214_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1990..2271)
DNA (282bp) protein (94aa)
NADH-ubiquinone/plastoquinone oxidoreductase, chain 6; K00339 NADH-quinone oxidoreductase subunit J [EC:1.6.5.3] Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003747268
NADH:ubiquinone oxidoreductase subunit 6 (chain J)
13_1_20cm_4_scaffold_1214_5
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(2317..3597)
DNA (1281bp) protein (427aa)
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5) Tax=RBG_16_Euryarchaeota_67_27_curated
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
NADH:ubiquinone oxidoreductase subunit H n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T4D3_9EURY
13_1_20cm_4_scaffold_1214_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(3594..4688)
DNA (1095bp) protein (365aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000369358F rbh
NADH dehydrogenase I subunit D Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
NADH dehydrogenase I subunit D
13_1_20cm_4_scaffold_1214_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(4689..5225)
DNA (537bp) protein (179aa)
NADH dehydrogenase subunit C (EC:1.6.99.5) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000374A030
NADH (or F420H2) dehydrogenase, subunit C
13_1_20cm_4_scaffold_1214_8
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(5222..5593)
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000376CD1C
NADH:ubiquinone oxidoreductase subunit 3 (chain A) Tax=RBG_16_Euryarchaeota_67_27_curated
NADH:ubiquinone oxidoreductase subunit 3 (chain A)
13_1_20cm_4_scaffold_1214_9
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

5718..6344
DNA (627bp) protein (209aa)
Oxidoreductase molybdopterin binding n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XEB2_9BACT
hypothetical protein Tax=RBG_16_Euryarchaeota_67_27_curated
oxidoreductase, molybdopterin binding
13_1_20cm_4_scaffold_1214_10
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

6454..7269
DNA (816bp) protein (272aa)
Sec-independent protein translocase protein TatC n=1 Tax=uncultured crenarchaeote RepID=Q702E5_9CREN
tatC; TatC subunit of twin-arginine targeting system Tax=RBG_16_Euryarchaeota_68_13_curated
tatC; TatC subunit of twin-arginine targeting system
13_1_20cm_4_scaffold_1214_11
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

7302..7727
DNA (426bp) protein (142aa)
Sec-independent protein secretion pathway component n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ER90_9CREN
hypothetical protein; K03116 sec-independent protein translocase protein TatA Tax=RBG_16_Euryarchaeota_67_27_curated
tatA; sec-independent protein translocase (twin-arginine translocation protein)
13_1_20cm_4_scaffold_1214_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

7812..9185
DNA (1374bp) protein (458aa)
FAD/FMN-containing dehydrogenase n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8N6_9EURY
FAD/FMN-containing dehydrogenase Tax=RBG_16_Euryarchaeota_68_13_curated
FAD/FMN-containing dehydrogenase
13_1_20cm_4_scaffold_1214_13
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9187..10455
DNA (1269bp) protein (423aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1214_14
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10509..10835)
DNA (327bp) protein (109aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1214_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(10832..11257)
DNA (426bp) protein (142aa)
Remark: blast hits result from repetitive sequences n=3 Tax=Aspergillus niger RepID=A2QGT1_ASPNC
Marine sediment metagenome DNA, contig: S01H4_C04992 Tax=RBG_16_Euryarchaeota_67_27_curated
hypothetical protein
13_1_20cm_4_scaffold_1214_16
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(11394..12353)
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=uncultured organism MedDCM-OCT-S04-C1 RepID=D6PJP4_9ZZZZ
oxidoreductase Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_1214_17
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12350..13669)
DNA (1320bp) protein (440aa)
Putative uncharacterized protein n=1 Tax=uncultured organism MedDCM-OCT-S04-C1 RepID=D6PJP4_9ZZZZ
menaquinol--cytochrome-c reductase (cytochrome bc complex) cytochrome b/c subunit Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1214_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(13678..14331)
DNA (654bp) protein (218aa)
Cytochrome b subunit of the bc complex n=1 Tax=uncultured organism MedDCM-OCT-S04-C1 RepID=D6PJP5_9ZZZZ
cytochrome b/b6 protein Tax=RBG_16_Euryarchaeota_68_13_curated
cytochrome b/b6 domain protein
13_1_20cm_4_scaffold_1214_19
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(14333..15136)
DNA (804bp) protein (268aa)
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1214_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15147..15440)
DNA (294bp) protein (98aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1214_21
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(15437..15898)
DNA (462bp) protein (154aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_1214_22
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

16221..16547
DNA (327bp) protein (109aa)
A-type ATP synthase subunit H n=1 Tax=Haloferax mucosum ATCC BAA-1512 RepID=M0IHN0_9EURY
atpH; A-type ATP synthase subunit H
Tax=RBG_16_Euryarchaeota_67_27_curated
13_1_20cm_4_scaffold_1214_23
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

16558..16857
DNA (300bp) protein (100aa)
V-type ATP synthase subunit I (EC:3.6.3.14) Tax=RBG_16_Euryarchaeota_67_27_curated
V-type ATP synthase subunit I n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BZ07_METCG
atpI; V-type ATP synthase subunit I
Displaying 23 items

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