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13_1_20cm_4_scaffold_1269

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1269_1
Thermococcus eurythermalis, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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2..235
DNA (234bp) protein (78aa)
Thermococcus eurythermalis strain A501, complete genome {ECO:0000313|EMBL:AIU69636.1}; TaxID=1505907 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" sour
13_1_20cm_4_scaffold_1269_2
RBG_16_Archaea_50_20_curated, Archaea

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304..1341
DNA (1038bp) protein (346aa)
Universally conserved protein n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKD6_HYPBU
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
recombinase RecA
13_1_20cm_4_scaffold_1269_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(1347..2111)
DNA (765bp) protein (255aa)
Hypothetical conserved protein n=1 Tax=uncultured crenarchaeote RepID=H5SJ42_9CREN
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
putative circadian clock protein, KaiC
13_1_20cm_4_scaffold_1269_4
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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2263..3273
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IH89_NITGG
hypothetical protein Tax=RBG_13_Bathyarchaeota_46_16b_curated
hypothetical protein
13_1_20cm_4_scaffold_1269_5
unknown

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3347..3544
DNA (198bp) protein (66aa)

This feature has no annotations

13_1_20cm_4_scaffold_1269_6
unknown

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3601..5433
DNA (1833bp) protein (611aa)

This feature has no annotations

13_1_20cm_4_scaffold_1269_7
RBG_16_Archaea_50_20_curated, Archaea

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5430..5807
DNA (378bp) protein (126aa)
Marine sediment metagenome DNA, contig: S12H4_L00878 Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_4_scaffold_1269_8
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

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comp(5781..6092)
DNA (312bp) protein (104aa)
peptidyl-tRNA hydrolase; K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] Tax=RBG_13_Bathyarchaeota_46_16b_curated
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
Peptidyl-tRNA hydrolase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IBX6_NITGG
13_1_20cm_4_scaffold_1269_9
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

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6215..6670
DNA (456bp) protein (152aa)
hypothetical protein Tax=RBG_13_Bathyarchaeota_52_12_curated
hypothetical protein
13_1_20cm_4_scaffold_1269_10
RBG_16_Archaea_50_20_curated, Archaea

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6889..7632
DNA (744bp) protein (248aa)
psmA; proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=RBG_16_Archaea_50_20_curated
proteasome alpha subunit (EC:3.4.25.1)
Proteasome alpha subunit n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Y4_9ARCH
13_1_20cm_4_scaffold_1269_11
RBG_16_Archaea_50_20_curated, Archaea

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7629..8318
DNA (690bp) protein (230aa)
Putative ribosome maturation protein SDO1 n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJH0_NITGG
ribosome maturation protein SDO1 Tax=RBG_16_Archaea_50_20_curated
rRNA metabolism protein, SBDS family
13_1_20cm_4_scaffold_1269_12
RBG_16_Archaea_50_20_curated, Archaea

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8330..9643
DNA (1314bp) protein (438aa)
Exosome complex component Rrp41 n=1 Tax=Pyrolobus fumarii (strain DSM 11204 / 1A) RepID=G0ECM9_PYRF1
rph; exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=RBG_16_Archaea_50_20_curated
exosome complex exonuclease 1
13_1_20cm_4_scaffold_1269_13
RBG_16_Archaea_50_20_curated, Archaea

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9643..10461
DNA (819bp) protein (273aa)
Exosome complex component Rrp42 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AH19_PYRYC
exosome complex RNA-binding protein Rrp42; K12589 exosome complex component RRP42 Tax=RBG_16_Archaea_50_20_curated
exosome complex RNA-binding protein Rrp42
13_1_20cm_4_scaffold_1269_14
RBG_16_Archaea_50_20_curated, Archaea

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10461..10928
DNA (468bp) protein (156aa)
50S ribosomal protein L37Ae n=1 Tax=Thermofilum sp. 1910b RepID=S5ZKQ1_9CREN
rpl37ae; 50S ribosomal protein L37Ae; K02921 large subunit ribosomal protein L37Ae Tax=RBG_16_Archaea_50_20_curated
50S ribosomal protein L37
13_1_20cm_4_scaffold_1269_15
RBG_16_Archaea_50_20_curated, Archaea

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11162..11584
DNA (423bp) protein (141aa)
Prefoldin subunit beta n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0ID44_NITGG
pfdB; prefoldin, subunit beta Tax=RBG_16_Archaea_50_20_curated
pfdB; prefoldin, subunit beta
13_1_20cm_4_scaffold_1269_16
RBG_16_Archaea_50_20_curated, Archaea

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11823..12626
DNA (804bp) protein (268aa)
Predicted phosphoesterase, DHH family n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BKC6_HYPBU
DHH family phosphoesterase; K06881 phosphoesterase RecJ domain-containing protein Tax=RBG_16_Archaea_50_20_curated
DHH family phosphoesterase
13_1_20cm_4_scaffold_1269_17
RBG_16_Archaea_50_20_curated, Archaea

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12687..13553
DNA (867bp) protein (289aa)
Cobalt/nickel ABC transporter ATP-binding protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Z3_9ARCH
ABC transporter; K02006 cobalt/nickel transport system ATP-binding protein Tax=RBG_16_Archaea_50_20_curated
cobalt/nickel ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_1269_18
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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13649..14392
DNA (744bp) protein (248aa)
Cobalt/nickel ABC transporter ATP-binding protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8Z4_9ARCH
hypothetical protein Tax=RBG_16_Bathyarchaeota_48_13_curated
cobalt/nickel ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_1269_19
RBG_16_Archaea_50_20_curated, Archaea

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14373..15149
DNA (777bp) protein (259aa)
hypothetical protein n=2 Tax=unclassified Crenarchaeota RepID=UPI0003624E5C
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
cobalt/nickel ABC transporter permease
13_1_20cm_4_scaffold_1269_20
unknown

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15328..15507
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 20 items

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