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13_1_20cm_4_scaffold_1277

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1277_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(97..888)
DNA (792bp) protein (264aa)
Enoyl-CoA hydratase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADQ0_GEMAT rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:BAH40627.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 /
enoyl-CoA hydratase
13_1_20cm_4_scaffold_1277_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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1338..1790
DNA (453bp) protein (151aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Uncharacterized protein id=4849848 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
Integral membrane protein CcmA
13_1_20cm_4_scaffold_1277_3
Leptolyngbya sp. PCC 7375, Leptolyngbya, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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1800..2678
DNA (879bp) protein (293aa)
Metalloendopeptidase-like membrane protein n=1 Tax=Leptolyngbya sp. PCC 7375 RepID=K9FIK4_9CYAN
Metalloendopeptidase-like membrane protein {ECO:0000313|EMBL:EKV01076.1}; TaxID=102129 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Leptolyngbya.;" source="Leptolyngbya sp
NlpD4; metalloendopeptidase-like membrane protein
13_1_20cm_4_scaffold_1277_4
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2892..4118)
DNA (1227bp) protein (409aa)
dinB; DNA polymerase IV (EC:2.7.7.7); K02346 DNA polymerase IV [EC:2.7.7.7] Tax=GWC2_Gemmatimonadetes_71_10_curated
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9Y5_GEMAT rbh
13_1_20cm_4_scaffold_1277_5
Acidobacterium capsulatum, Acidobacterium, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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comp(4112..4303)
DNA (192bp) protein (64aa)
Transcription regulator, gntR family n=1 Tax=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) RepID=C1F342_ACIC5
Transcription regulator, gntR family {ECO:0000313|EMBL:ACO31525.1}; TaxID=240015 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Acidobacterium.;" source="Acidobacterium capsula
GntR family transcriptional regulator
13_1_20cm_4_scaffold_1277_6
unknown

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4935..5186
DNA (252bp) protein (84aa)

This feature has no annotations

13_1_20cm_4_scaffold_1277_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5225..6217)
DNA (993bp) protein (331aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RSGA_GEMAT
ribosome biogenesis GTPase RsgA
13_1_20cm_4_scaffold_1277_8
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6214..6621)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL7_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG92069.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_4_scaffold_1277_9
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(6657..7604)
DNA (948bp) protein (316aa)
Putative proline dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL8_GEMAT
Proline dehydrogenase {ECO:0000313|EMBL:AHG92070.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Proline dehydrogenase
13_1_20cm_4_scaffold_1277_10
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(7604..9277)
DNA (1674bp) protein (558aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABL9_GEMAT rbh
Peptidase M14 carboxypeptidase A {ECO:0000313|EMBL:AHG92073.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M14 carboxypeptidase A
13_1_20cm_4_scaffold_1277_11
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9425..10060)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6Y8_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH37998.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_1277_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10057..10659)
DNA (603bp) protein (201aa)
Glycoside hydrolase family 13 domain protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TEP7_9DELT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
glycoside hydrolase family 13 domain protein
13_1_20cm_4_scaffold_1277_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(10643..11242)
DNA (600bp) protein (200aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA74_GEMAT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_4_scaffold_1277_14
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11354..13039)
DNA (1686bp) protein (562aa)
Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:BAH39898.1}; EC=4.2.1.- {ECO:0000313|EMBL:BAH39898.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmat
fadJ; enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase (EC:4.2.1.-)
Enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM1_GEMAT
13_1_20cm_4_scaffold_1277_15
Alteromonas macleodii, Alteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13036..13419)
DNA (384bp) protein (128aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha (EC:5.1.2.3)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00037274B9
Fatty acid oxidation complex subunit alpha {ECO:0000256|SAAS:SAAS00051619}; TaxID=314275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas.;" sourc
13_1_20cm_4_scaffold_1277_16
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(13421..14722)
DNA (1302bp) protein (434aa)
Acetyl-CoA acyltransferase {ECO:0000313|EMBL:BAH39899.1}; EC=2.3.1.16 {ECO:0000313|EMBL:BAH39899.1};; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimona
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM2_GEMAT
13_1_20cm_4_scaffold_1277_17
unknown

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comp(14773..15258)
DNA (486bp) protein (162aa)

This feature has no annotations

Displaying 17 items

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