ggKbase home page

13_1_20cm_4_scaffold_1284

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1284_1
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..390)
DNA (390bp) protein (130aa)
cytochrome B6 n=1 Tax=Nitrospina sp. AB-629-B18 RepID=UPI000377E64E
petB; cytochrome b6 Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
petB; cytochrome b6
13_1_20cm_4_scaffold_1284_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(411..947)
DNA (537bp) protein (179aa)
petC; Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) (EC:1.10.9.1) Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
petC; Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) (EC:1.10.9.1)
Similar to Rieske 2Fe-2S iron sulfur protein (Cytochrome b6-F complex) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MG49_9BACT
13_1_20cm_4_scaffold_1284_3
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1099..1275
DNA (177bp) protein (59aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
13_1_20cm_4_scaffold_1284_4
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1379..1804)
DNA (426bp) protein (142aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UKN6_ANASK
Uncharacterized protein {ECO:0000313|EMBL:ACG71327.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;" s
hypothetical protein
13_1_20cm_4_scaffold_1284_5
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1826..2578)
DNA (753bp) protein (251aa)
DNA-binding protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XHR7_SORCE
DNA-binding protein Tax=RBG_16_Anaeromyxobacter_69_14_curated
DNA-binding protein
13_1_20cm_4_scaffold_1284_6
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2862..4484)
DNA (1623bp) protein (541aa)
Amidase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MX51_CORCM
Amidase {ECO:0000313|EMBL:AFE08880.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Corallococcus coral
gatA2; amidase
13_1_20cm_4_scaffold_1284_7
unknown

Not on your lists

comp(4509..5027)
DNA (519bp) protein (173aa)

This feature has no annotations

13_1_20cm_4_scaffold_1284_trna_1
unknown

Not on your lists

5129..5201
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_1284_8
GWA1_Bdellovibrionales_52_35_curated, Bdellovibrionaceae, Bdellovibrionales, Bdellovibrio, Bacteria

Not on your lists

5224..6831
DNA (1608bp) protein (536aa)
peptide chain release factor 3 Tax=GWA1_Bdellovibrionales_52_35_curated
Peptide chain release factor 3 id=2976044 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! rbh
peptide chain release factor 3
13_1_20cm_4_scaffold_1284_9
Ktedonobacter racemifer, Ktedonobacter, Ktedonobacterales, Ktedonobacteria, Chloroflexi, Bacteria

Not on your lists

7011..8000
DNA (990bp) protein (330aa)
Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TZT5_9CHLR
Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein {ECO:0000313|EMBL:EFH82075.1}; Flags: Precursor;; TaxID=485913 species="Bacteria; Chloroflexi; Ktedonobacteria; Ktedonob
aliphatic sulfonates ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_1284_10
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7997..8815
DNA (819bp) protein (273aa)
Sulfate ABC transporter ATP-binding protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67R34_SYMTH
Sulfate ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAD39859.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.;" source="Symbiob
sulfate ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_1284_11
Oscillochloris trichoides, Oscillochloris, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

8799..9608
DNA (810bp) protein (270aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IFP6_9CHLR
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:EFO79992.1}; TaxID=765420 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Chloroflexineae; Oscilloc
binding-protein-dependent transporters inner membrane component
13_1_20cm_4_scaffold_1284_12
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9716..10870
DNA (1155bp) protein (385aa)
Adenylate/guanylate cyclase domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D4R0_MYXXD
Adenylate/guanylate cyclase domain protein {ECO:0000313|EMBL:ABF86692.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus
guanylate cyclase
13_1_20cm_4_scaffold_1284_13
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10867..12174
DNA (1308bp) protein (436aa)
Adenylate/guanylate cyclase domain protein n=1 Tax=Myxococcus xanthus (strain DK 1622) RepID=Q1D4R0_MYXXD
Adenylate/guanylate cyclase domain protein {ECO:0000313|EMBL:ABF86692.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus
guanylate cyclase
13_1_20cm_4_scaffold_1284_14
Streptomyces roseochromogenus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12242..13531
DNA (1290bp) protein (430aa)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI00036F7374
Uncharacterized protein {ECO:0000313|EMBL:EST34272.1}; TaxID=1352936 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseochromogenus subsp
phosphoesterase
13_1_20cm_4_scaffold_1284_15
unknown

Not on your lists

comp(13563..13790)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_20cm_4_scaffold_1284_16
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(13861..14331)
DNA (471bp) protein (157aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Displaying 17 items

View Taxonomy