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13_1_20cm_4_scaffold_1324

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1324_1
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(1..417)
DNA (417bp) protein (139aa)
hypothetical protein Tax=RBG_16_NC10_65_8_curated
id=4224087 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_20cm_4_scaffold_1324_2
R_NC10_66_22, NC10, Bacteria

Not on your lists

comp(521..1417)
DNA (897bp) protein (299aa)
luciferase-like protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases id=2655987 bin=GWC2_Methylomirabilis_70_16 species=uncultured Chloroflexi bacterium HF0200_06I16 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
F420-dependent dehydrogenase
13_1_20cm_4_scaffold_1324_3
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

1585..1749
DNA (165bp) protein (55aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative regulatory protein, FmdB family id=4900375 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
FmdB family regulatory protein
13_1_20cm_4_scaffold_1324_4
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1784..2779
DNA (996bp) protein (332aa)
Putative zinc-containing alcohol dehydrogenase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y5Z9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:ETX02055.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
alcohol dehydrogenase
13_1_20cm_4_scaffold_1324_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(2811..4268)
DNA (1458bp) protein (486aa)
putative histidine kinase Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Histidine kinase id=4849342 bin=GWC2_Methylomirabilis_70_16 species=Aromatoleum aromaticum genus=Aromatoleum taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
histidine kinase
13_1_20cm_4_scaffold_1324_6
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

Not on your lists

comp(4265..5089)
DNA (825bp) protein (275aa)
Histidine kinase (EC:2.7.13.3) Tax=GWC2_RIF_CHLX_73_18_curated
Putative Histidine kinase id=2877061 bin=GWC2_Chloroflexi_73_18 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
PAS sensor protein
13_1_20cm_4_scaffold_1324_7
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5213..6943
DNA (1731bp) protein (577aa)
hypothetical protein Tax=RBG_13_Deltaproteobacteria_65_10_curated
13_1_20cm_4_scaffold_1324_8
CSP1_2_Dadabacteria, Dadabacteria, Bacteria

Not on your lists

7701..8039
DNA (339bp) protein (113aa)
putative 2Fe-2S ferredoxin; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4] Tax=CSP1_2_Dadabacteria
putative 2Fe-2S ferredoxin; K00363 nitrite reductase (NAD(P)H) small subunit [EC:1.7.1.4] id=14426521 bin=bin1_lowGC species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin1_lowGC organism_group=Unknown_CP
putative 2Fe-2S ferredoxin
13_1_20cm_4_scaffold_1324_9
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

8036..8653
DNA (618bp) protein (206aa)
XRE family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
XRE family transcriptional regulator id=14627854 bin=bin7_NC10_sister species=Brevibacillus panacihumi genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
XRE family transcriptional regulator
13_1_20cm_4_scaffold_1324_10
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(8675..9316)
DNA (642bp) protein (214aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein RTW15_08591 id=4646426 bin=GWA2_Methylomirabilis_73_35 species=Ruegeria conchae genus=Ruegeria taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_1324_11
RBG_16_NC10_65_8_curated, NC10, Bacteria

Not on your lists

comp(9371..10114)
DNA (744bp) protein (248aa)
hypothetical protein Tax=RBG_16_NC10_65_8_curated
13_1_20cm_4_scaffold_1324_12
GWC2_Methylomirabilis_70_24, GWC2_Methylomirabilis_70_24, GWC2_Methylomirabilis_70_24, GWC2_Methylomirabilis_70_24, Methylomirabilis, Bacteria

Not on your lists

comp(10111..10359)
DNA (249bp) protein (83aa)
id=4958125 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_1324_13
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10367..10783)
DNA (417bp) protein (139aa)
FOG-CBS domain-containing protein n=1 Tax=Clostridium stercorarium subsp. stercorarium (strain ATCC 35414 / DSM 8532 / NCIMB 11754) RepID=L7VNF6_CLOSH
Transcriptional regulator {ECO:0000313|EMBL:AGC67996.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium
FOG-CBS domain-containing protein
13_1_20cm_4_scaffold_1324_14
CG_Syntroph_01, Syntrophus, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10770..11597)
DNA (828bp) protein (276aa)
hypothetical protein; K04767 acetoin utilization protein AcuB Tax=CG_Syntroph_01
CBS domain containing membrane protein id=3859512 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_1324_15
RLO_Entotheonella_69_37, Entotheonella, Bacteria

Not on your lists

comp(11597..12160)
DNA (564bp) protein (188aa)
UspA domain protein n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TRG7_9CHLR
UspA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Entotheonella_69_37_curated
putative universal stress protein
13_1_20cm_4_scaffold_1324_16
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12536..12943)
DNA (408bp) protein (136aa)
hypothetical protein n=1 Tax=Bradyrhizobium elkanii RepID=UPI000378EEDC
h16_A1812; hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_13b_curated
13_1_20cm_4_scaffold_1324_17
Pusillimonas sp. T7-7, Pusillimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13190..14047
DNA (858bp) protein (286aa)
Branched-chain amino acid ABC transporter n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GWE1_PUSST rbh
Branched-chain amino acid ABC transporter {ECO:0000313|EMBL:AEC21338.1}; TaxID=1007105 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Pusillimonas.;" source="P
branched-chain amino acid ABC transporter
Displaying 17 items

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