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13_1_20cm_4_scaffold_137

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_137_1
unknown

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3..455
DNA (453bp) protein (151aa)

This feature has no annotations

13_1_20cm_4_scaffold_137_2

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comp(517..888)
DNA (372bp) protein (124aa)
Uncharacterized protein (Fragment) n=1 Tax=mine drainage metagenome RepID=T1BZ16_9ZZZZ
Uncharacterized protein {ECO:0000313|EMBL:EQD58274.1}; Flags: Fragment;; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
13_1_20cm_4_scaffold_137_3
RBG_16_Planctomycetes_43_13_curated, Planctomycetes, Bacteria

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987..2375
DNA (1389bp) protein (463aa)
Transposase, IS4 family n=1 Tax=Chlorobium phaeobacteroides (strain DSM 266) RepID=A1BJN8_CHLPD rbh
hypothetical protein Tax=RBG_16_Planctomycetes_43_13_curated
hypothetical protein
13_1_20cm_4_scaffold_137_4
unknown

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comp(2653..2910)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_4_scaffold_137_5
Cyclobacterium marinum, Cyclobacterium, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2948..5998)
DNA (3051bp) protein (1017aa)
hypothetical protein n=1 Tax=Segetibacter koreensis RepID=UPI00037A3021 rbh
Membrane-bound dehydrogenase domain protein {ECO:0000313|EMBL:AEL27485.1}; Flags: Precursor;; TaxID=880070 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cyclobacterium
membrane-bound dehydrogenase domain-containing protein
13_1_20cm_4_scaffold_137_6
unknown

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6054..6599
DNA (546bp) protein (182aa)

This feature has no annotations

13_1_20cm_4_scaffold_137_7
Hyphomonas beringensis, Hyphomonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(6803..8143)
DNA (1341bp) protein (447aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8UXT1_TERSS
Uncharacterized protein {ECO:0000313|EMBL:KCZ55443.1}; TaxID=1280946 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Hyphomonadaceae; Hyphomonas.;" source="Hyphomonas beringen
hypothetical protein
13_1_20cm_4_scaffold_137_8
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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8529..10112
DNA (1584bp) protein (528aa)
Tetratricopeptide repeat protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IT86_KORVE
Tetratricopeptide repeat/TPR repeat {ECO:0000313|EMBL:CDM64739.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_4_scaffold_137_9
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

10123..11880
DNA (1758bp) protein (586aa)
RNA-binding protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000372786F
Uncharacterized protein {ECO:0000313|EMBL:CDM64385.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_4_scaffold_137_10
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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comp(11950..14673)
DNA (2724bp) protein (908aa)
TPR repeat-containing protein n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I7H9_METB6
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AGB02678.1}; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" source="Methanore
hypothetical protein
13_1_20cm_4_scaffold_137_11
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(14733..18395)
DNA (3663bp) protein (1221aa)
Cna B-type protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RF0_SOLUE rbh
Cna B-type protein {ECO:0000313|EMBL:ABJ87770.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Soli
CnaB domain-containing protein
13_1_20cm_4_scaffold_137_12
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

comp(18628..19872)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003601FEE rbh
Redoxin domain protein {ECO:0000313|EMBL:ABJ84103.1}; Flags: Precursor;; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="
redoxin domain-containing protein
13_1_20cm_4_scaffold_137_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

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20037..22190
DNA (2154bp) protein (718aa)
Cellulase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IUL8_KORVE
Cellulase {ECO:0000313|EMBL:ABF39432.1}; Flags: Precursor;; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Candidatus Koribacter.;" source="Koribacter versatilis (
cellulase
13_1_20cm_4_scaffold_137_14
Bradyrhizobium sp. ORS 278, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(22486..23001)
DNA (516bp) protein (172aa)
Putative 6-oxocamphor hydrolase {ECO:0000313|EMBL:CAL77481.1}; EC=4.2.1.17 {ECO:0000313|EMBL:CAL77481.1};; TaxID=114615 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizob
6-oxocamphor hydrolase (EC:4.2.1.17)
Putative 6-oxocamphor hydrolase n=1 Tax=Bradyrhizobium sp. (strain ORS278) RepID=A4YUA5_BRASO
13_1_20cm_4_scaffold_137_15
Mesorhizobium sp. LSJC280B00, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23143..23712)
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Kaistia granuli RepID=UPI00037FA5F4
Oxidoreductase {ECO:0000313|EMBL:ESW84606.1}; TaxID=1287336 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSJC280B
short-chain dehydrogenase/reductase
13_1_20cm_4_scaffold_137_16
CSP1_5_NC10, NC10, Bacteria

Not on your lists

comp(23876..24862)
DNA (987bp) protein (329aa)
alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1] Tax=CSP1_5_NC10
alcohol dehydrogenase; K00001 alcohol dehydrogenase [EC:1.1.1.1] id=14430729 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin3_NC10 organism_group=NC10
alcohol dehydrogenase
13_1_20cm_4_scaffold_137_17
Candidatus Solibacter usitatus, Candidatus Solibacter, Solibacterales, Solibacteres, Acidobacteria, Bacteria

Not on your lists

25242..25571
DNA (330bp) protein (110aa)
Transcriptional regulator, TetR family n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01RR8_SOLUE
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABJ87652.1}; TaxID=234267 species="Bacteria; Acidobacteria; Solibacteres; Solibacterales; Solibacteraceae; Candidatus Solibacter.;" source="Sol
TetR family transcriptional regulator
Displaying 17 items

View Taxonomy