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13_1_20cm_4_scaffold_14473

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_14473_1
unknown

Not on your lists

comp(1..438)
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_20cm_4_scaffold_14473_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

568..798
DNA (231bp) protein (77aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=3461019 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_14473_3
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(802..2088)
DNA (1287bp) protein (429aa)
processing peptidase (EC:3.4.24.64) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
processing peptidase (EC:3.4.24.64) id=14627604 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
processing peptidase (EC:3.4.24.64)
13_1_20cm_4_scaffold_14473_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2085..2549)
DNA (465bp) protein (155aa)
M16B family peptidase (EC:3.4.24.-); K01417 [EC:3.4.24.-] Tax=GWA2_Rokubacteria_73_35_curated
Peptidase M16 domain protein id=1746030 bin=GWA2_Methylomirabilis_73_35 species=Leptolyngbya sp. PCC 7375 genus=Leptolyngbya taxon_order=Oscillatoriales taxon_class=unknown phylum=Cyanobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M16 domain-containing protein
13_1_20cm_4_scaffold_14473_5
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2521..3270)
DNA (750bp) protein (250aa)
M16B family peptidase (EC:3.4.24.-); K01417 [EC:3.4.24.-] Tax=GWA2_Rokubacteria_73_35_curated
Zinc protease id=1746032 bin=GWA2_Methylomirabilis_73_35 species=Stigmatella aurantiaca genus=Stigmatella taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
peptidase M16 domain-containing protein
13_1_20cm_4_scaffold_14473_6
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3319..3948)
DNA (630bp) protein (210aa)
yedZ; heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Sulfoxide reductase heme-binding subunit YedZ id=1746036 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis rbh
yedZ; heme-molybdoenzyme heme-containing subunit YedZ; cytochrome b subunit
13_1_20cm_4_scaffold_14473_7
R_Rokubacteria_71_18, Rokubacteria, Bacteria

Not on your lists

comp(3954..4493)
DNA (540bp) protein (180aa)
yedY; exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
Sulfoxide reductase catalytic subunit YedY id=4012814 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
yedY; exported heme-molybdoenzyme molybdopterin-containing subunit YedY; TAT export
13_1_20cm_4_scaffold_14473_8
Cupriavidus sp. SK-4, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4806..5330)
DNA (525bp) protein (175aa)
thioredoxin n=1 Tax=Herbaspirillum lusitanum RepID=UPI0002F82947
Thioredoxin {ECO:0000313|EMBL:EYS93969.1}; TaxID=574750 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus sp. SK-4.;"
hypothetical protein
13_1_20cm_4_scaffold_14473_9
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(5336..5872)
DNA (537bp) protein (179aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative uncharacterized protein id=1746143 bin=GWA2_Methylomirabilis_73_35 species=Sagittula stellata genus=Sagittula taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Sperm-specific protein Don juan
13_1_20cm_4_scaffold_14473_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6019..6339)
DNA (321bp) protein (107aa)
id=4895587 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
id=14626788 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_20cm_4_scaffold_14473_11
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(6351..6650)
DNA (300bp) protein (100aa)
arsR; putative arsenical resistance operon repressor Tax=GWC2_Rokubacteria_70_16_curated
Putative transcriptional regulator, ArsR family protein id=4759445 bin=GWC2_Methylomirabilis_70_16 species=Cupriavidus sp. HPC(L) genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ArsR family transcriptional regulator
13_1_20cm_4_scaffold_14473_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(6683..8401)
DNA (1719bp) protein (573aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=1746145 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
organic solvent tolerance ABC transporter substrate-binding protein
13_1_20cm_4_scaffold_14473_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

8438..9223
DNA (786bp) protein (262aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100); K00059 3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WBV7_BACSK
13_1_20cm_4_scaffold_14473_14
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

9311..10129
DNA (819bp) protein (273aa)
haloalkane dehalogenase; K01563 haloalkane dehalogenase [EC:3.8.1.5] Tax=GWA2_Rokubacteria_73_35_curated
Alpha/beta hydrolase fold protein id=1746149 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
haloalkane dehalogenase
13_1_20cm_4_scaffold_14473_15
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(10126..10731)
DNA (606bp) protein (202aa)
OmpA/MotB domain-containing protein Tax=GWA2_Rokubacteria_73_35_curated
OmpA/MotB domain protein id=1746151 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
outer membrane protein
13_1_20cm_4_scaffold_14473_16
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(10909..11394)
DNA (486bp) protein (162aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Uncharacterized protein id=1746153 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_14473_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(11404..11514)
DNA (111bp) protein (37aa)
TENA/THI-4 family; K03707 thiaminase (transcriptional activator TenA) [EC:3.5.99.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
4-amino-5-aminomethyl-2-methylpyrimidine deaminase (EC:3.5.99.2)
Transcriptional activator, TenA family id=4231331 bin=GWC2_Methylomirabilis_70_24 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Displaying 17 items

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