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13_1_20cm_4_scaffold_145

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_145_1
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1..576
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9S0_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH39247.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_145_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

733..3192
DNA (2460bp) protein (820aa)
bfeA; ferric enterobactin receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
bfeA; ferric enterobactin receptor; K02014 iron complex outermembrane recepter protein id=24658360 bin=Salinibacter_ruber species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=Salinibacter_ruber
bfeA; ferric enterobactin receptor
13_1_20cm_4_scaffold_145_3
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(3479..3904)
DNA (426bp) protein (142aa)
id=3479344 bin=GWC1_Spirochaetes_27_15 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC1_Spirochaetes_27_15 organism_group=Spirochaetes
Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_4_scaffold_145_4
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4023..5078)
DNA (1056bp) protein (352aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_145_5
Streptococcus mitis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(5209..5616)
DNA (408bp) protein (136aa)
IgA FC receptor {ECO:0000313|EMBL:KJQ76083.1}; TaxID=28037 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus mitis.;"
13_1_20cm_4_scaffold_145_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

5888..6268
DNA (381bp) protein (127aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_4_scaffold_145_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6265..6921
DNA (657bp) protein (219aa)
Glycoside hydrolase family 13 domain protein n=1 Tax=Desulfovibrio alkalitolerans DSM 16529 RepID=S7TEP7_9DELT
glycoside hydrolase family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
glycoside hydrolase family 13
13_1_20cm_4_scaffold_145_8
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6918..7616
DNA (699bp) protein (233aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_4_scaffold_145_9
Agrobacterium arsenijevicii, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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7729..10035
DNA (2307bp) protein (769aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:S
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Fodinicurvata sediminis RepID=UPI0003B6EB3C rbh
metE; 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase
13_1_20cm_4_scaffold_145_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

10096..10713
DNA (618bp) protein (206aa)
Nitrogen fixation protein NifU n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SPR6_9BACT
thioredoxin-like protein; K07400 Fe/S biogenesis protein NfuA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
thioredoxin-like protein
13_1_20cm_4_scaffold_145_11
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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10723..11973
DNA (1251bp) protein (417aa)
biotin carboxylase-like Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Biotin carboxylase-like protein id=4290030 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
biotin carboxylase-like
13_1_20cm_4_scaffold_145_12
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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comp(11977..12798)
DNA (822bp) protein (274aa)
methyltransferase type 11 Tax=CSP1_3_Armatimonadetes
methyltransferase type 11 id=14632043 bin=bin9_gal15 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
ubiE; ubiquinone/menaquinone biosynthesis methylase
13_1_20cm_4_scaffold_145_13
RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated, Acidobacteria, Bacteria

Not on your lists

comp(12813..13481)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Gracilimonas tropica RepID=UPI00035EB63D
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated
hypothetical protein
13_1_20cm_4_scaffold_145_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

13559..14155
DNA (597bp) protein (199aa)
RNA polymerase sigma-70 factor, ECF subfamily n=1 Tax=uncultured prokaryote RepID=H5S8U6_9ZZZZ
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG93808.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_4_scaffold_145_15
unknown

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14152..14739
DNA (588bp) protein (196aa)

This feature has no annotations

13_1_20cm_4_scaffold_145_16
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(14736..15230)
DNA (495bp) protein (165aa)
Transcription elongation factor GreA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM5_GEMAT
Transcription elongation factor GreA/GreB domain-containing protein {ECO:0000313|EMBL:AHG87594.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
transcription elongation factor GreA/GreB domain-containing protein
13_1_20cm_4_scaffold_145_17
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

15322..16128
DNA (807bp) protein (269aa)
chromosome partitioning ATPase; K03593 ATP-binding protein involved in chromosome partitioning Tax=CSP1_6_Rokubacteria
chromosome partitioning ATPase; K03593 ATP-binding protein involved in chromosome partitioning id=14626562 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
mrp; putative ATPase
13_1_20cm_4_scaffold_145_18
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

Not on your lists

16125..16568
DNA (444bp) protein (148aa)
hypothetical protein Tax=GWA2_Rokubacteria_70_23_curated
Putative uncharacterized protein id=4863498 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_145_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16565..16813
DNA (249bp) protein (83aa)
fer; putative ferredoxin; K05337 ferredoxin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
fer; putative ferredoxin; K05337 ferredoxin id=1242375 bin=RBG2 species=RBG2 genus=RBG2 taxon_order=RBG2 taxon_class=RBG2 phylum=Chloroflexi tax=RBG2 organism_group=Chloroflexi
putative ferredoxin
13_1_20cm_4_scaffold_145_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16865..18832
DNA (1968bp) protein (656aa)
universal stress protein UspA n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B4FCA4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_145_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18829..20103
DNA (1275bp) protein (425aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI0003825029
radical SAM protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
radical SAM protein
13_1_20cm_4_scaffold_145_22
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

20103..21833
DNA (1731bp) protein (577aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein id=14429058 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_145_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

21820..22620
DNA (801bp) protein (267aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_145_24
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

22617..23420
DNA (804bp) protein (268aa)
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
Putative (Diheme) protein id=4083690 bin=GWA2_Methylomirabilis_73_35 species=endosymbiont of Tevnia jerichonana genus=unknown taxon_order=unknown taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
13_1_20cm_4_scaffold_145_25
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

23413..24981
DNA (1569bp) protein (523aa)
putative cytochrome c Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Hypothetical (Diheme) protein id=4488143 bin=GWC2_Methylomirabilis_70_24 species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
putative cytochrome c
13_1_20cm_4_scaffold_145_26
RBG_16_Armatimonadetes_67_12_curated, Armatimonadetes, Bacteria

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25007..25519
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5F0A6
hypothetical protein Tax=RBG_16_Armatimonadetes_67_12_curated
hypothetical protein
Displaying 26 items

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