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13_1_20cm_4_scaffold_1481

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1481_1
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(389..940)
DNA (552bp) protein (184aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI000381CE7C
NODE_36, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96768.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
RNA polymerase sigma factor
13_1_20cm_4_scaffold_1481_2
Hydrocarboniphaga effusa, Hydrocarboniphaga, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

992..1822
DNA (831bp) protein (277aa)
serine/threonine protein kinase (EC:2.7.11.1)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI0003629987
Uncharacterized protein {ECO:0000313|EMBL:EIT69752.1}; TaxID=1172194 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Sinobacteraceae; Hydrocarboniphaga.;" source="Hydrocarboni
13_1_20cm_4_scaffold_1481_3
R_Gammaproteobacteria_63_22, Gammaproteobacteria, Proteobacteria, Bacteria

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1850..3070
DNA (1221bp) protein (407aa)
Tetratricopeptide TPR_2 repeat protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01NM4_SOLUE
protein kinase Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_63_22_curated
hypothetical protein
13_1_20cm_4_scaffold_1481_4
unknown

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3079..4962
DNA (1884bp) protein (628aa)

This feature has no annotations

13_1_20cm_4_scaffold_1481_5
Afipia felis, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4826..6538)
DNA (1713bp) protein (571aa)
CzcA family heavy metal efflux pump n=1 Tax=Afipia felis ATCC 53690 RepID=K8NKJ8_AFIFE
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:EKS29636.1}; TaxID=883080 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia felis A
cytochrome C peroxidase
13_1_20cm_4_scaffold_1481_6
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(6535..7878)
DNA (1344bp) protein (448aa)
Heavy metal efflux pump, CzcA family, putative Acriflavine resistance protein B n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PE74_9BACT
Heavy metal efflux pump, CzcA family, putative Acriflavine resistance protein B {ECO:0000313|EMBL:CBK41533.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;"
CzcA family heavy metal efflux pump
13_1_20cm_4_scaffold_1481_7
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7878..8876)
DNA (999bp) protein (333aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Acidovorax citrulli (strain AAC00-1) RepID=A1TI68_ACIAC
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:ABM30656.1}; Flags: Precursor;; TaxID=397945 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acido
RND family efflux transporter MFP subunit
13_1_20cm_4_scaffold_1481_8
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

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comp(8876..10123)
DNA (1248bp) protein (416aa)
Outer membrane efflux protein n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QQV4_9CYAN
Outer membrane efflux protein {ECO:0000313|EMBL:AGY60090.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
tolC; outer membrane efflux protein
13_1_20cm_4_scaffold_1481_9
GWC2_Elusimicrobia_56_31_curated, Elusimicrobia, Bacteria

Not on your lists

10228..12084
DNA (1857bp) protein (619aa)
integral membrane sensor signal transduction histidine kinase Tax=GWC2_Elusimicrobia_56_31_curated
Integral membrane sensor signal transduction histidine kinase id=2517212 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
histidine kinase
13_1_20cm_4_scaffold_1481_10
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

12081..13469
DNA (1389bp) protein (463aa)
sigma-54 dependent DNA-binding response regulator Tax=CSP1_6_Rokubacteria
sigma-54 dependent DNA-binding response regulator id=14626189 bin=bin7_NC10_sister species=Geopsychrobacter electrodiphilus genus=Geopsychrobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
atoC1; sigma-54 dependent DNA-binding response regulator
13_1_20cm_4_scaffold_1481_11
BJP_IG2157_Desulfuromonadales_56_134, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13615..14226
DNA (612bp) protein (204aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHP1_RHOMR
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen
Tax=BJP_IG2157_Desulfuromonadales_56_134
13_1_20cm_4_scaffold_1481_12
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(14586..15545)
DNA (960bp) protein (320aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_4_scaffold_1481_13

Not on your lists

15621..16310
DNA (690bp) protein (230aa)
Aspartate/glutamate racemase superfamily protein n=1 Tax=Geobacter bemidjiensis (strain Bem / ATCC BAA-1014 / DSM 16622) RepID=B5EHN1_GEOBB
Uncharacterized protein {ECO:0000313|EMBL:KKK81402.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
aspartate/glutamate racemase superfamily protein
13_1_20cm_4_scaffold_1481_14
Devosia sp. 17-2-E-8, Devosia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16326..17666)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Deinococcus apachensis RepID=UPI0003769A4F
Short-chain dehydrogenase {ECO:0000313|EMBL:KFL24805.1}; TaxID=1535287 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Devosia.;" source="Devosia sp. 17-2-E-8.;
putative oxidoreductase
13_1_20cm_4_scaffold_1481_15
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

17757..18278
DNA (522bp) protein (174aa)
Transcriptional regulator, MarR family n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XP02_9BACT
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EEF58468.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.
MarR family transcriptional regulator
13_1_20cm_4_scaffold_1481_16
unknown

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18275..18451
DNA (177bp) protein (59aa)

This feature has no annotations

13_1_20cm_4_scaffold_1481_17
R_Betaproteobacteria_66_14, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18479..18922
DNA (444bp) protein (148aa)
Acyl dehydratase n=1 Tax=uncultured gamma proteobacterium HF0770_33G18 RepID=E7C7L0_9GAMM
MaoC domain-containing protein dehydratase Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_66_14_curated
MaoC domain-containing protein dehydratase
13_1_20cm_4_scaffold_1481_18
Kutzneria sp. 744, Kutzneria, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18976..20538
DNA (1563bp) protein (521aa)
medium-chain acyl-CoA synthetase (EC:6.2.1.2)
hypothetical protein n=1 Tax=Nocardiopsis chromatogenes RepID=UPI00034C3C99
Acetyl-CoA synthetase {ECO:0000313|EMBL:EWM19462.1}; TaxID=345341 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kutzneria.;" source="Kutzneria sp. 744.;"
13_1_20cm_4_scaffold_1481_19
unknown

Not on your lists

comp(20853..21020)
DNA (168bp) protein (56aa)

This feature has no annotations

Displaying 19 items

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