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13_1_20cm_4_scaffold_156

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_156_1
unknown

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306..494
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_4_scaffold_156_2
Candidatus Nitrosoarchaeum koreensis, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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937..1485
DNA (549bp) protein (183aa)
Metal dependent phosphohydrolase n=1 Tax=Candidatus Nitrosoarchaeum koreensis MY1 RepID=F9CWS1_9ARCH
Metal dependent phosphohydrolase {ECO:0000313|EMBL:EGP93723.1}; TaxID=1001994 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Ni
Metal dependent phosphohydrolase
13_1_20cm_4_scaffold_156_3
RBG_16_Archaea_50_20_curated, Archaea

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comp(1551..2087)
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=unclassified Crenarchaeota (miscellaneous) RepID=UPI0003727633
hypothetical protein Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_4_scaffold_156_4
unknown

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comp(2135..2632)
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_20cm_4_scaffold_156_5
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

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comp(2694..3368)
DNA (675bp) protein (225aa)
type 11 methyltransferase Tax=CG_Levy_01
Methyltransferase type 11 id=4803517 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
type 11 methyltransferase
13_1_20cm_4_scaffold_156_6
Candidatus Caldiarchaeum subterraneum, Candidatus Caldiarchaeum, Thaumarchaeota, Archaea

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3617..4567
DNA (951bp) protein (317aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N9I0_9ARCH
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=311458 species="Archaea; Thaumarchaeota; unclassified Thaumarchaeota; Candidatus Caldiarchaeum.;" source="Candidatus Caldiarchaeum subterraneum.
13_1_20cm_4_scaffold_156_7
RBG_16_Archaea_50_20_curated, Archaea

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4607..6391
DNA (1785bp) protein (595aa)
DNA ligase I, ATP-dependent Dnl1 (EC:6.5.1.1)
DNA ligase n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGC4_ACIB4
ATP-dependent DNA ligase I Tax=RBG_16_Archaea_50_20_curated
13_1_20cm_4_scaffold_156_8
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

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6395..7204
DNA (810bp) protein (270aa)
DNA primase small subunit n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S1T6_FERPA
DNA primase small subunit Tax=RBG_16_Bathyarchaeota_48_13_curated
DNA primase small subunit
13_1_20cm_4_scaffold_156_9
unknown

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comp(7210..7356)
DNA (147bp) protein (49aa)

This feature has no annotations

13_1_20cm_4_scaffold_156_10
GWB2_Deltaproteobacteria_55_19_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(7408..8583)
DNA (1176bp) protein (392aa)
hypothetical protein Tax=GWB2_Deltaproteobacteria_55_19_curated
Aminotransferase class I and II id=2009528 bin=GWB2_Proteobacteria_55_19 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Proteobacteria_55_19 organism_group=Proteobacteria organism_desc=Good
hypothetical protein
13_1_20cm_4_scaffold_156_11
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

comp(8580..9473)
DNA (894bp) protein (298aa)
agmatinase; K01480 agmatinase [EC:3.5.3.11] Tax=RBG_13_Bathyarchaeota_38_9_curated
agmatinase (EC:3.5.3.11)
Agmatinase (Agmatine ureohydrolase) n=1 Tax=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) RepID=A2BIW8_HYPBU
13_1_20cm_4_scaffold_156_12
unknown

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9550..9966
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_20cm_4_scaffold_156_13
RBG_16_Archaea_50_20_curated, Archaea

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comp(9959..11605)
DNA (1647bp) protein (549aa)
DNA topoisomerase I; K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RBG_16_Archaea_50_20_curated
DNA topoisomerase 1 n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=TOP1_PYRAB
topA; DNA topoisomerase I
13_1_20cm_4_scaffold_156_14
unknown

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comp(12092..12325)
DNA (234bp) protein (78aa)

This feature has no annotations

13_1_20cm_4_scaffold_156_15
Methanothermobacter thermautotrophicus, Methanothermobacter, Methanobacteriales, Methanobacteria, Euryarchaeota, Archaea

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12499..13746
DNA (1248bp) protein (416aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1; Short=BPG-independent PGAM 1;; Short=Phosphoglyceromutase 1;; Short=aPGAM 1;; EC=5.4.2.12;; TaxID=187420 species="Archaea; Euryarchaeota;
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase 1 n=1 Tax=Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H) RepID=APGM1_METTH
13_1_20cm_4_scaffold_156_16
RBG_13_Bathyarchaeota_46_16b_curated, Bathyarchaeota, Archaea

Not on your lists

comp(13803..15179)
DNA (1377bp) protein (459aa)
sun protein (fmu protein); K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RBG_13_Bathyarchaeota_46_16b_curated
Ribosomal RNA small subunit methyltransferase B n=1 Tax=uncultured Acidobacteria bacterium RepID=H5SCJ9_9BACT
tRNA/rRNA cytosine-C5-methylase
13_1_20cm_4_scaffold_156_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

15181..17763
DNA (2583bp) protein (861aa)
DNA polymerase I (EC:2.7.7.7) Tax=RBG_16_Archaea_50_20_curated
DNA polymerase I (EC:2.7.7.7)
DNA polymerase n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ERA4_9CREN
13_1_20cm_4_scaffold_156_18
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

17771..18520
DNA (750bp) protein (250aa)
F420-dependent oxidoreductase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] Tax=RBG_16_Archaea_50_20_curated
F420-dependent oxidoreductase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDA3_THET1
F420-dependent oxidoreductase
13_1_20cm_4_scaffold_156_19
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

18686..19303
DNA (618bp) protein (206aa)
Tax=RBG_16_Archaea_50_20_curated
Displaying 19 items

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