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13_1_20cm_4_scaffold_1645

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1645_1
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

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comp(1..255)
DNA (255bp) protein (85aa)
sufD; putative iron-sulfur cluster assembly protein SufD; K09015 Fe-S cluster assembly protein SufD Tax=RBG_16_Acidobacteria_68_9_curated
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD id=14632748 bin=bin9_gal15 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin9_gal15 organism_group=GAL15
13_1_20cm_4_scaffold_1645_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(258..1031)
DNA (774bp) protein (258aa)
Iron-regulated ABC transporter ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FeS assembly ATPase SufC id=2754156 bin=GWA2_Ignavibacteria_55_11 species=Caldithrix abyssi genus=Caldithrix taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
Iron-sulfur cluster assembly ATPase protein SufC
13_1_20cm_4_scaffold_1645_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1028..2461)
DNA (1434bp) protein (478aa)
Iron-regulated ABC transporter membrane component SufB n=1 Tax=Chthonomonas calidirosea T49 RepID=S0ETI0_9BACT
Fe-S cluster assembly protein SufB Tax=RBG_16_Gemmatimonadetes_66_8_curated
Iron-regulated ABC transporter membrane component SufB
13_1_20cm_4_scaffold_1645_4
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

comp(2570..3181)
DNA (612bp) protein (204aa)
Putative uncharacterized protein n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XWF6_9BACT
uncharacterized MobA-like protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
4-diphosphocytidyl-2C-methyl-D-erythritol synthase
13_1_20cm_4_scaffold_1645_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3241..3786
DNA (546bp) protein (182aa)
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Peptide deformylase id=4811764 bin=GWC2_Ignavibacteria_56_12 species=Haliangium ochraceum genus=Haliangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
formylmethionine deformylase
13_1_20cm_4_scaffold_1645_6
Hydrogenivirga sp. 128-5-R1-1, Hydrogenivirga, Aquificales, Aquificae, Aquificae, Bacteria

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3895..4509
DNA (615bp) protein (205aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089};; Hydroxymethylpyrimidine phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00089}; Thiam
Phosphomethylpyrimidine synthase n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V0J2_9AQUI
thiC; thiamine biosynthesis protein thiC
13_1_20cm_4_scaffold_1645_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

4517..5131
DNA (615bp) protein (205aa)
phosphomethylpyrimidine synthase n=1 Tax=Synechococcus sp. CB0101 RepID=UPI00020017B4
thiC; thiamine biosynthesis protein ThiC; K03147 thiamine biosynthesis protein ThiC Tax=GWC2_Gemmatimonadetes_71_10_curated
thiamine biosynthesis protein ThiC
13_1_20cm_4_scaffold_1645_8
R_Brevundimonas_70_19, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5128..5787)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XTW0_SORCE
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Brevundimonas_70_19_curated
hypothetical protein
13_1_20cm_4_scaffold_1645_9
Mycobacterium hassiacum, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5775..6167)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Actinopolyspora mortivallis RepID=UPI00035D3021
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EKF25598.1}; TaxID=1122247 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium
transcriptional regulator
13_1_20cm_4_scaffold_1645_10
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

6340..6612
DNA (273bp) protein (91aa)
Ferredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC37_GEMAT
ferredoxin Tax=GWC2_Gemmatimonadetes_71_10_curated
4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein
13_1_20cm_4_scaffold_1645_11
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(6609..7427)
DNA (819bp) protein (273aa)
putative 3-oxoadipate enol-lactonase (EC:3.1.1.24) Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative hydrolase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC35_GEMAT
putative hydrolase
13_1_20cm_4_scaffold_1645_12
halophilic archaeon J07HX64, Halobacteriales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

comp(7424..8359)
DNA (936bp) protein (312aa)
1-aminocyclopropane-1-carboxylate deaminase n=1 Tax=halophilic archaeon J07HX64 RepID=U1NZ17_9EURY
1-aminocyclopropane-1-carboxylate deaminase {ECO:0000313|EMBL:ERH09460.1}; TaxID=1085028 species="Archaea; Euryarchaeota; Halobacteria; Halobacteriales.;" source="halophilic archaeon J07HX64.;"
ACC deaminase/D-cysteine desulfhydrase family protein
13_1_20cm_4_scaffold_1645_13
unknown

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8376..8546
DNA (171bp) protein (57aa)

This feature has no annotations

13_1_20cm_4_scaffold_1645_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

8543..9697
DNA (1155bp) protein (385aa)
putative ribonuclease; K03684 ribonuclease D [EC:3.1.13.5] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative ribonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC33_GEMAT
3'-5' exonuclease
13_1_20cm_4_scaffold_1645_15
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(9694..10002)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC31_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_1645_16
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10027..10389)
DNA (363bp) protein (121aa)
putative thiol-disulfide oxidoreductase DCC Tax=CSP1_8_Deltaproteobacteria
putative thiol-disulfide oxidoreductase DCC id=14622943 bin=bin5_DeltaP species=unknown genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=bin5_DeltaP organism_group=Deltaproteobacteria
putative thiol-disulfide oxidoreductase DCC
13_1_20cm_4_scaffold_1645_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10386..11558)
DNA (1173bp) protein (391aa)
Beta-lactamase family protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC30_GEMAT
beta-lactamase family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
beta-lactamase
13_1_20cm_4_scaffold_1645_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(11549..12622)
DNA (1074bp) protein (358aa)
AmmeMemoRadiSam system radical SAM enzyme {ECO:0000313|EMBL:CDM64616.1}; EC=1.97.1.4 {ECO:0000313|EMBL:CDM64616.1};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinom
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4) id=14430795 bin=bin3_NC10 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=bin3_NC10 organism_group=NC10
pflA; pyruvate formate-lyase activating enzyme (EC:1.97.1.4)
Displaying 18 items

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