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13_1_20cm_4_scaffold_1688

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Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1688_1
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

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1..522
DNA (522bp) protein (174aa)
Tetratricopeptide repeat-containing protein {ECO:0000313|EMBL:EPR44062.1}; Flags: Precursor;; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionace
13_1_20cm_4_scaffold_1688_2
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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519..2054
DNA (1536bp) protein (512aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000376EF43
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
transcriptional regulator domain-containing protein
13_1_20cm_4_scaffold_1688_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2080..2412)
DNA (333bp) protein (111aa)
UPF0129 protein
Probable ribonuclease VapC id=2479200 bin=GWC2_Methylomirabilis_70_24 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_1688_4
unknown

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comp(2471..2773)
DNA (303bp) protein (101aa)

This feature has no annotations

13_1_20cm_4_scaffold_1688_5
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(2928..3482)
DNA (555bp) protein (185aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHG91778.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
13_1_20cm_4_scaffold_1688_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(3619..4782)
DNA (1164bp) protein (388aa)
Citrate transporter n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SN05_9BACT
citrate transporter Tax=RBG_16_Gemmatimonadetes_66_8_curated
citrate transporter
13_1_20cm_4_scaffold_1688_7
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(4851..5819)
DNA (969bp) protein (323aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F9_GEMAT
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
GCN5-related N-acetyltransferase
13_1_20cm_4_scaffold_1688_8
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(5800..8079)
DNA (2280bp) protein (760aa)
Exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F7_GEMAT
Exonuclease {ECO:0000313|EMBL:BAH37817.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-27 / DSM 145
exonuclease
13_1_20cm_4_scaffold_1688_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(8079..9113)
DNA (1035bp) protein (345aa)
Exonuclease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F6_GEMAT
exonuclease Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Calcineurin-like phosphoesterase superfamily domain protein
13_1_20cm_4_scaffold_1688_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9116..11068)
DNA (1953bp) protein (651aa)
Uncharacterized protein n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SJW7_9CYAN rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_1688_11
RBG_16_Armatimonadetes_58_9_curated, Armatimonadetes, Bacteria

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comp(11065..12054)
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Pseudanabaena sp. PCC 6802 RepID=UPI000344AFEB
hypothetical protein Tax=RBG_16_Armatimonadetes_58_9_curated
hypothetical protein
13_1_20cm_4_scaffold_1688_12
CG_Proteo_01, Proteobacteria, Bacteria

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comp(12057..12791)
DNA (735bp) protein (245aa)
ubiG; bifunctional: 3-demethylubiquinone-9 3-methyltransferase; 2-octaprenyl-6-hydroxy phenol methylase (EC:2.1.1.64); K00568 2-polyprenyl-6-hydroxyphenyl methylase / 3-demethylubiquinone-9 3-methyltr
3-demethylubiquinone-9 3-methyltransferase (EC:2.1.1.64)
Ubiquinone biosynthesis O-methyltransferase n=1 Tax=Magnetococcus sp. (strain MC-1) RepID=A0L9I8_MAGSM
13_1_20cm_4_scaffold_1688_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(12788..13282)
DNA (495bp) protein (165aa)
O-methyltransferase family 3 n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SHY4_THEM7
O-methyltransferase family protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
O-methyltransferase family protein
13_1_20cm_4_scaffold_1688_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(13374..13817)
DNA (444bp) protein (148aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_1688_15
RBG_13_Aminicenantes_59_9_curated, Aminicenantes, Bacteria

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13888..15114
DNA (1227bp) protein (409aa)
peptidase M24; K01271 Xaa-Pro dipeptidase [EC:3.4.13.9] Tax=RBG_13_Aminicenantes_59_9_curated
Proline dipeptidase id=8266084 bin=CD_OP8_4m species=Indibacter alkaliphilus genus=Indibacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=CD_OP8_4m organism_group=OP8 (Aminicenantes)
peptidase M24
13_1_20cm_4_scaffold_1688_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(15111..16313)
DNA (1203bp) protein (401aa)
aspC; aspartate aminotransferase (EC:2.6.1.1); K00812 aspartate aminotransferase [EC:2.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
aspC; aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F2_GEMAT
13_1_20cm_4_scaffold_1688_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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16398..17531
DNA (1134bp) protein (378aa)
DEAD/DEAH box helicase domain protein n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IH25_9CHLR
DbpA RNA-binding domain protein {ECO:0000313|EMBL:AHG90226.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
DbpA RNA-binding domain protein
13_1_20cm_4_scaffold_1688_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(17605..17895)
DNA (291bp) protein (97aa)
DNA-binding protein HU n=1 Tax=Bacillus clausii (strain KSM-K16) RepID=Q5WDV9_BACSK
hup; DNA-binding protein Hup Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA-binding protein HU
13_1_20cm_4_scaffold_1688_19
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

18182..18787
DNA (606bp) protein (202aa)
Thymidine kinase {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|HAMAP-Rule:MF_00124, ECO:0000256|RuleBase:RU000544};; TaxID=861299 species="Bacteria; Gemmat
Thymidine kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6F0_GEMAT
Thymidine kinase
13_1_20cm_4_scaffold_1688_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18803..19819
DNA (1017bp) protein (339aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Dephospho-CoA kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E7_GEMAT
Dephospho-CoA kinase
13_1_20cm_4_scaffold_1688_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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19887..20276
DNA (390bp) protein (130aa)
Glycine cleavage system H protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6E6_GEMAT
gcvH; glycine cleavage system H protein; K02437 glycine cleavage system H protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
gcvH; glycine cleavage system H protein
13_1_20cm_4_scaffold_1688_22
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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20287..23184
DNA (2898bp) protein (966aa)
gcvP; glycine dehydrogenase (EC:1.4.4.2); K00281 glycine dehydrogenase [EC:1.4.4.2] Tax=GWC2_Gemmatimonadetes_71_10_curated
Glycine dehydrogenase (decarboxylating) n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HVC6_CYAP4 rbh
glycine dehydrogenase
13_1_20cm_4_scaffold_1688_23
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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23171..24031
DNA (861bp) protein (287aa)
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_16_Gemmatimonadetes_66_8_curated
biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] id=24486945 bin=RBG_19FT_COMBO_Aminicenantes_65_30 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_65_30 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
biotin/lipoate A/B protein ligase
13_1_20cm_4_scaffold_1688_24
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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24044..25426
DNA (1383bp) protein (461aa)
Putative ABC transporter substrate binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A765_GEMAT
putative peptide ABC transporter substrate binding protein; K02035 peptide/nickel transport system substrate-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
ABC-type transporter, periplasmic subunit
Displaying 24 items

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