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13_1_20cm_4_scaffold_1779

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1779_1
Stackebrandtia nassauensis, Stackebrandtia, Glycomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..304)
DNA (303bp) protein (101aa)
Transcriptional regulator, LuxR family n=1 Tax=Stackebrandtia nassauensis (strain DSM 44728 / NRRL B-16338 / NBRC 102104 / LLR-40K-21) RepID=D3PUJ1_STANL
Transcriptional regulator, LuxR family {ECO:0000313|EMBL:ADD43004.1}; TaxID=446470 species="Bacteria; Actinobacteria; Glycomycetales; Glycomycetaceae; Stackebrandtia.;" source="Stackebrandtia nassauen
LuxR family transcriptional regulator
13_1_20cm_4_scaffold_1779_2
Salinispora arenicola, Salinispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

349..603
DNA (255bp) protein (85aa)
hypothetical protein n=1 Tax=Salinispora pacifica RepID=UPI000366FFEC
Uncharacterized protein {ECO:0000313|EMBL:ABV97989.1}; TaxID=391037 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Salinispora.;" source="Salinispora arenicola (strain CNS-2
hypothetical protein
13_1_20cm_4_scaffold_1779_3
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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699..1532
DNA (834bp) protein (278aa)
Putative lysozyme (Modular protein) {ECO:0000313|EMBL:CCH19775.1}; EC=3.2.1.17 {ECO:0000313|EMBL:CCH19775.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; M
Putative lysozyme (Modular protein) n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L7H8_9ACTO
putative glycosyl hydrolase
13_1_20cm_4_scaffold_1779_4
R_Phenylobacterium_69_31, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1543..2286)
DNA (744bp) protein (248aa)
3-oxoacyl-ACP reductase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI0002628270
short-chain dehydrogenase/reductase SDR Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_69_31_curated
fabG; short-chain dehydrogenase
13_1_20cm_4_scaffold_1779_5
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(2322..3617)
DNA (1296bp) protein (432aa)
Peptidase M1 membrane alanine aminopeptidase n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P615_STRVO
Peptidase M1 membrane alanine aminopeptidase {ECO:0000313|EMBL:AEM85776.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vi
peptidase M1 membrane alanine aminopeptidase
13_1_20cm_4_scaffold_1779_6
Streptomyces violaceusniger, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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comp(3611..7450)
DNA (3840bp) protein (1280aa)
Non-ribosomal peptide synthetase domain protein n=1 Tax=Streptomyces violaceusniger Tu 4113 RepID=G2P616_STRVO rbh
Non-ribosomal peptide synthetase domain protein {ECO:0000313|EMBL:AEM85777.1}; TaxID=653045 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces
non-ribosomal peptide synthetase domain-containing protein rbh
13_1_20cm_4_scaffold_1779_7
Gloeocapsa sp. PCC 7428, Gloeocapsa, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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7669..8616
DNA (948bp) protein (316aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI00035F9604
Transcriptional regulator, LacI family {ECO:0000313|EMBL:AFZ30953.1}; TaxID=1173026 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Gloeocapsa.;" source="Gloeocapsa sp. PCC 742
LacI family transcriptional regulator
13_1_20cm_4_scaffold_1779_8
Nocardia seriolae, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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8629..8823
DNA (195bp) protein (65aa)
Uncharacterized protein {ECO:0000313|EMBL:GAM44527.1}; TaxID=37332 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia seriolae.;"
13_1_20cm_4_scaffold_1779_9
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(8826..9584)
DNA (759bp) protein (253aa)
Methyltransferase FkbM family n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1A9D8_THECD rbh
Methyltransferase FkbM family {ECO:0000313|EMBL:ACY96834.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvat
methyltransferase FkbM family
13_1_20cm_4_scaffold_1779_10
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(9594..10313)
DNA (720bp) protein (240aa)
Putative 5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:CCH19175.1}; EC=1.1.1.193 {ECO:0000313|EMBL:CCH19175.1};; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporale
Putative 5-amino-6-(5-phosphoribosylamino)uracil reductase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L5S8_9ACTO
bifunctional deaminase-reductase domain-containing protein
13_1_20cm_4_scaffold_1779_11
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10310..11764)
DNA (1455bp) protein (485aa)
Uncharacterized protein n=1 Tax=Actinomadura madurae LIID-AJ290 RepID=U2MAA8_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH19183.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
hypothetical protein
13_1_20cm_4_scaffold_1779_12
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11892..12818)
DNA (927bp) protein (309aa)
Uncharacterized protein n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L5T0_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH19177.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupini str. Lupa
hypothetical protein
13_1_20cm_4_scaffold_1779_13
Verrucosispora maris, Verrucosispora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(12896..13459)
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Verrucosispora maris (strain AB-18-032) RepID=F4FHG2_VERMA
Uncharacterized protein {ECO:0000313|EMBL:AEB45134.1}; TaxID=263358 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Verrucosispora.;" source="Verrucosispora maris (strain AB-
hypothetical protein
13_1_20cm_4_scaffold_1779_14
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13399..14583)
DNA (1185bp) protein (395aa)
Putative glycosyl transferase group 1 n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L5T2_9ACTO rbh
Micromonospora carbonacea strain JXNU-1 contig1, whole genome shotgun sequence {ECO:0000313|EMBL:KIR66997.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
group 1 glycosyl transferase
13_1_20cm_4_scaffold_1779_15
Streptomyces natalensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14580..14978)
DNA (399bp) protein (133aa)
6-pyruvoyl tetrahydropterin synthase n=1 Tax=Streptomyces sp. FxanaC1 RepID=UPI0003714F1C
6-pyruvoyl tetrahydropterin synthase {ECO:0000313|EMBL:KIZ16312.1}; TaxID=1240678 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces natalensi
ptpS; 6-pyruvoyl tetrahydropterin synthase
13_1_20cm_4_scaffold_1779_16
Micromonospora lupini, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14983..15954)
DNA (972bp) protein (324aa)
Putative zinc-binding dehydrogenase n=1 Tax=Micromonospora lupini str. Lupac 08 RepID=I0L5T4_9ACTO rbh
Putative zinc-binding dehydrogenase {ECO:0000313|EMBL:CCH19181.1}; TaxID=1150864 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora lupi
FAD dependent oxidoreductase
13_1_20cm_4_scaffold_1779_17
Micromonospora aurantiaca, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16062..16874
DNA (813bp) protein (271aa)
CDP-alcohol phosphatidyltransferase n=1 Tax=Micromonospora sp. (strain L5) RepID=E8S478_MICSL
CDP-alcohol phosphatidyltransferase {ECO:0000313|EMBL:ADL44681.1}; TaxID=644283 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora auran
CDP-alcohol phosphatidyltransferase
13_1_20cm_4_scaffold_1779_18
unknown

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comp(17355..17711)
DNA (357bp) protein (119aa)

This feature has no annotations

13_1_20cm_4_scaffold_1779_19
Micromonospora sp. ATCC 39149, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

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comp(17751..19151)
DNA (1401bp) protein (467aa)
ABC transporter ATP-binding protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RFX9_9ACTO rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:EEP70241.1}; TaxID=219305 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micromonospora.;" source="Micromonospora sp. A
ABC transporter-like protein
Displaying 19 items

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