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13_1_20cm_4_scaffold_191

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_191_1
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(103..1512)
-----------------
DNA (1410bp)
protein (470aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RBG_16_Euryarchaeota_68_13_curated
Cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=6 Tax=Pelosinus fermentans RepID=I8SHQ7_9FIRM
13_1_20cm_4_scaffold_191_2
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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1655..2581
-----------------
DNA (927bp)
protein (309aa)
Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_191_3
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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comp(2387..3511)
-----------------
DNA (1125bp)
protein (375aa)
cystathionine gamma-lyase (EC:4.4.1.1) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cystathionine gamma-lyase (EC:4.4.1.1)
Cystathionine gamma-lyase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I7V7_METCZ
13_1_20cm_4_scaffold_191_4
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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comp(3557..4927)
-----------------
DNA (1371bp)
protein (457aa)
cystathionine beta-synthase; K01697 cystathionine beta-synthase [EC:4.2.1.22] Tax=RBG_16_Euryarchaeota_67_27_curated
Cystathionine beta-synthase id=3805564 bin=GWC2_Ignavibacteria_56_12 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
cystathionine beta-synthase
13_1_20cm_4_scaffold_191_trna_1
unknown

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comp(5014..5086)
-----------------
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_191_5
Kosmotoga olearia, Kosmotoga, Kosmotogales, Thermotogae, Thermotogae, Bacteria

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5428..8001
-----------------
DNA (2574bp)
protein (858aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036D000B
Extracellular solute-binding protein family 5 {ECO:0000313|EMBL:ACR80240.1}; Flags: Precursor;; TaxID=521045 species="Bacteria; Thermotogae; Kosmotogales; Kosmotogaceae; Kosmotoga.;" source="Kosmotoga
extracellular solute-binding protein family 5
13_1_20cm_4_scaffold_191_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

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8116..9408
-----------------
DNA (1293bp)
protein (431aa)
HD superfamily phosphohydrolase n=1 Tax=Aciduliprofundum sp. (strain MAR08-339) RepID=L0HND9_ACIS0 rbh
metal dependent phosphohydrolase; K06885 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
HD superfamily phosphohydrolase
13_1_20cm_4_scaffold_191_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

9544..10638
-----------------
DNA (1095bp)
protein (365aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003778FC2 rbh
cell division protein FtsZ; K03531 cell division protein FtsZ Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cell division protein FtsZ
13_1_20cm_4_scaffold_191_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10771..11877
-----------------
DNA (1107bp)
protein (369aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003829ACA
cell division protein FtsZ Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
cell division protein FtsZ
13_1_20cm_4_scaffold_191_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

11883..12134
-----------------
DNA (252bp)
protein (84aa)
Protein translocase subunit SecE n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8P5_9EURY
secE; preprotein translocase subunit SecE Tax=RBG_16_Euryarchaeota_68_13_curated
secE; preprotein translocase subunit SecE
13_1_20cm_4_scaffold_191_10
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

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12139..13065
-----------------
DNA (927bp)
protein (309aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003720D25
Putative transcription antitermination protein NusG Tax=RBG_16_Euryarchaeota_67_27_curated
Putative transcription antitermination protein NusG
13_1_20cm_4_scaffold_191_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(13124..13822)
-----------------
DNA (699bp)
protein (233aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B69C52
hypothetical protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Methyltransferase domain
13_1_20cm_4_scaffold_191_12
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

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13947..14426
-----------------
DNA (480bp)
protein (160aa)
50S ribosomal protein L11 n=2 Tax=unclassified Thermoplasmatales RepID=M7TUR0_9EURY
50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_16_Euryarchaeota_68_13_curated
50S ribosomal protein L11
13_1_20cm_4_scaffold_191_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(14466..15284)
-----------------
DNA (819bp)
protein (273aa)
Transcriptional regulator, TrmB-like n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6NB21_9ARCH
transcriptional regulator TrmB Tax=RBG_16_Euryarchaeota_68_13_curated
transcriptional regulator, TrmB-like
13_1_20cm_4_scaffold_191_14
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


15536..16174
-----------------
DNA (639bp)
protein (213aa)
50S ribosomal protein L1 n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003677105
LSU ribosomal protein L10Ae (L1p) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
50S ribosomal protein L1
13_1_20cm_4_scaffold_191_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


16184..17065
-----------------
DNA (882bp)
protein (294aa)
50S ribosomal protein L10 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7V4_9EURY
rplP0; acidic ribosomal protein P0 Tax=RBG_16_Euryarchaeota_67_27_curated
rplP0; acidic ribosomal protein P0
13_1_20cm_4_scaffold_191_16
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

17071..17379
-----------------
DNA (309bp)
protein (103aa)
50S ribosomal protein L12 n=2 Tax=unclassified Thermoplasmatales RepID=M7T3Z7_9EURY
rpl12p; 50S ribosomal protein L12 Tax=RBG_16_Euryarchaeota_67_27_curated
rpl12p; 50S ribosomal protein L12
13_1_20cm_4_scaffold_191_17
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(17575..17712)
-----------------
DNA (138bp)
protein (46aa)
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
13_1_20cm_4_scaffold_191_18
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(17811..18827)
-----------------
DNA (1017bp)
protein (339aa)
Radical SAM domain protein n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3T952_ACIB4
TIGR01210 family protein Tax=RBG_16_Euryarchaeota_68_13_curated
Radical SAM domain protein
13_1_20cm_4_scaffold_191_19
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(18871..20265)
-----------------
DNA (1395bp)
protein (465aa)
PREDICTED: fibrous sheath CABYR-binding protein-like n=1 Tax=Ceratitis capitata RepID=UPI000329F997
Pc22g03720 Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_4_scaffold_191_20
Metallosphaera yellowstonensis, Metallosphaera, Sulfolobales, Thermoprotei, Crenarchaeota, Archaea

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comp(20348..20692)
-----------------
DNA (345bp)
protein (115aa)
rnhA; ribonuclease HI (EC:3.1.26.4)
Ribonuclease HI n=1 Tax=Metallosphaera yellowstonensis MK1 RepID=H2C1M4_9CREN
Ribonuclease HI {ECO:0000313|EMBL:EHP70145.1}; TaxID=671065 species="Archaea; Crenarchaeota; Thermoprotei; Sulfolobales; Sulfolobaceae; Metallosphaera.;" source="Metallosphaera yellowstonensis MK1.;"
13_1_20cm_4_scaffold_191_21
unknown

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20923..21075
-----------------
DNA (153bp)
protein (51aa)

This feature has no annotations

Displaying 22 items

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