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13_1_20cm_4_scaffold_1968

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_1968_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..1110)
DNA (1110bp) protein (370aa)
argininosuccinate synthase family protein (EC:6.3.4.5); K01940 argininosuccinate synthase [EC:6.3.4.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Uncharacterized protein n=2 Tax=Populus RepID=B9HKP8_POPTR
Argininosuccinate synthase
13_1_20cm_4_scaffold_1968_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1273..2370
DNA (1098bp) protein (366aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG1_RHOM4
xylose isomerase domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
xylose isomerase domain-containing protein
13_1_20cm_4_scaffold_1968_3
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

2313..2849
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI00037570C5
Xylose isomerase domain-containing protein TIM barrel {ECO:0000313|EMBL:AHG88425.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Xylose isomerase domain-containing protein TIM barrel
13_1_20cm_4_scaffold_1968_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2846..4297
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7A9_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
GMC oxidoreductase
13_1_20cm_4_scaffold_1968_5
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4239..4427
DNA (189bp) protein (63aa)
Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZXJ4_9BACT
Glucose-methanol-choline (GMC) oxidoreductase:NAD binding site {ECO:0000313|EMBL:EON78792.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; unclassified
monooxygenase FAD-binding protein
13_1_20cm_4_scaffold_1968_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

4540..5133
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HCB2_SALRM
Tat pathway signal sequence domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_1968_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

5133..6407
DNA (1275bp) protein (425aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B3_GEMAT
putative oxidoreductase Tax=RBG_16_Gemmatimonadetes_66_8_curated
putative oxidoreductase
13_1_20cm_4_scaffold_1968_8
RBG_13_Aminicenantes_62_12_curated, Aminicenantes, Bacteria

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6515..7207
DNA (693bp) protein (231aa)
hypothetical protein Tax=RBG_13_Aminicenantes_62_12_curated
hypothetical protein id=24469341 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_1_20cm_4_scaffold_1968_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

7213..8814
DNA (1602bp) protein (534aa)
beta-N-acetylhexosaminidase (EC:3.2.1.52); K12373 hexosaminidase [EC:3.2.1.52] Tax=GWC2_Gemmatimonadetes_71_10_curated
beta-N-acetylhexosaminidase (EC:3.2.1.52)
Beta-N-acetylhexosaminidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A7B4_GEMAT rbh
13_1_20cm_4_scaffold_1968_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8925..9152
DNA (228bp) protein (76aa)
putative peroxiredoxin (EC:1.11.1.15) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_1968_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9162..9500
DNA (339bp) protein (113aa)
putative peroxiredoxin (EC:1.11.1.15) Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative peroxiredoxin (EC:1.11.1.15)
Putative peroxiredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA68_GEMAT
13_1_20cm_4_scaffold_1968_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9506..10000)
DNA (495bp) protein (165aa)
Thioredoxin n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP5_GEMAT
thioredoxin Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Redoxin domain protein
13_1_20cm_4_scaffold_1968_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(9997..10698)
DNA (702bp) protein (234aa)
thiol--disulfide interchange protein; K04084 thiol:disulfide interchange protein DsbD [EC:1.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Thiol--disulfide interchange protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ADP4_GEMAT
thiol--disulfide interchange protein
13_1_20cm_4_scaffold_1968_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(10841..11722)
DNA (882bp) protein (294aa)
Oxidoreductase domain protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0MJG6_RHOM4
oxidoreductase domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
oxidoreductase domain-containing protein
13_1_20cm_4_scaffold_1968_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(12047..13243)
DNA (1197bp) protein (399aa)
putative nucleoside transporter Tax=GWC2_Gemmatimonadetes_71_10_curated
putative nucleoside transporter id=12556627 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
putative nucleoside transporter
13_1_20cm_4_scaffold_1968_16
unknown

Not on your lists

13564..13803
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_4_scaffold_1968_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(13917..14258)
DNA (342bp) protein (114aa)
Arginine repressor n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=ARGR_PELTS
ArgR; arginine repressor; K03402 transcriptional regulator of arginine metabolism Tax=RBG_16_Gemmatimonadetes_66_8_curated
ArgR; arginine repressor
13_1_20cm_4_scaffold_1968_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(14271..15461)
DNA (1191bp) protein (397aa)
Cytosine deaminase-like metal-dependent hydrolase n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEA9_CHLTF
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
amidohydrolase
13_1_20cm_4_scaffold_1968_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(15541..16101)
DNA (561bp) protein (187aa)
penicillin-binding protein; K05366 penicillin-binding protein 1A [EC:2.4.1.- 3.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Penicillin-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A626_GEMAT
penicillin-binding protein
Displaying 19 items

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