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13_1_20cm_4_scaffold_198

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_198_1
R_Deltaproteobacteria_44_53, Deltaproteobacteria, Proteobacteria, Bacteria

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1..717
DNA (717bp) protein (239aa)
sdhA; Succinate dehydrogenase flavoprotein subunit (EC:1.3.99.1) Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_44_53_curated
sdhA; succinate dehydrogenase flavoprotein subunit (EC:1.3.5.1); K00239 succinate dehydrogenase flavoprotein subunit [EC:1.3.99.1] id=14430250 bin=bin3_NC10 species=Acidothermus cellulolyticus genus=Acidothermus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin3_NC10 organism_group=NC10
succinate dehydrogenase flavoprotein subunit
13_1_20cm_4_scaffold_198_2

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720..1463
DNA (744bp) protein (248aa)
Succinate dehydrogenase subunit B {ECO:0000313|EMBL:EQB62873.1}; TaxID=1379698 species="Bacteria.;" source="candidate division Zixibacteria bacterium RBG-1.;"
Succinate dehydrogenase subunit B id=1250010 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
fumarate reductase iron-sulfur subunit
13_1_20cm_4_scaffold_198_3
RBG_13_Chloroflexi_66_10_curated, Chloroflexi, Bacteria

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1442..2701
DNA (1260bp) protein (420aa)
putative oxidoreductase; K03885 NADH dehydrogenase [EC:1.6.99.3] Tax=RBG_13_Chloroflexi_66_10_curated
Pyridine nucleotide-disulfide oxidoreductase, FAD/NAD(P)-binding domain-containing protein id=4451068 bin=GWF2_Lentisphaerae_57_35 species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
putative oxidoreductase
13_1_20cm_4_scaffold_198_4
unknown

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comp(2665..2931)
DNA (267bp) protein (89aa)

This feature has no annotations

13_1_20cm_4_scaffold_198_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2932..4401)
DNA (1470bp) protein (490aa)
PAS sensor protein n=1 Tax=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) RepID=A9W9X5_CHLAA
GAF sensor hybrid histidine kinase Tax=GWC2_Gemmatimonadetes_71_10_curated
PAS sensor protein
13_1_20cm_4_scaffold_198_6
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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4513..7038
DNA (2526bp) protein (842aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
Glutamyl-and glutaminyl-tRNA synthetase id=4166726 bin=GWA2_Ignavibacteria_55_11 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome rbh
hypothetical protein
13_1_20cm_4_scaffold_198_7
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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7188..9131
DNA (1944bp) protein (648aa)
Glutamate carboxypeptidase II n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4P5_GEMAT
Peptidase M28 {ECO:0000313|EMBL:AHG88926.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M28
13_1_20cm_4_scaffold_198_8
unknown

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9164..9619
DNA (456bp) protein (152aa)

This feature has no annotations

13_1_20cm_4_scaffold_198_9

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9626..11890
DNA (2265bp) protein (755aa)
Uncharacterized protein n=1 Tax=Rhodobacter sp. AKP1 RepID=L1KFU6_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKN85651.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
13_1_20cm_4_scaffold_198_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(11871..12398)
DNA (528bp) protein (176aa)
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13); K01494 dCTP deaminase [EC:3.5.4.13] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
dcd; deoxycytidine triphosphate deaminase (EC:3.5.4.13)
Deoxycytidine triphosphate deaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=DCD_GEMAT
13_1_20cm_4_scaffold_198_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12544..12909
DNA (366bp) protein (122aa)
NADH-ubiquinone/plastoquinone oxidoreductase chain 3; K00330 NADH-quinone oxidoreductase subunit A [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase n=1 Tax=Geopsychrobacter electrodiphilus RepID=UPI000366E02F
NAD(P)H-quinone oxidoreductase subunit 3
13_1_20cm_4_scaffold_198_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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12914..13519
DNA (606bp) protein (202aa)
nuoB; NADH-quinone oxidoreductase chain B (EC:1.6.99.5); K00331 NADH-quinone oxidoreductase subunit B [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit B n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z3_GEMAT
NAD(P)H-quinone oxidoreductase subunit K
13_1_20cm_4_scaffold_198_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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13516..14109
DNA (594bp) protein (198aa)
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5); K00332 NADH-quinone oxidoreductase subunit C [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
nuoC; NADH-quinone oxidoreductase chain C (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit C n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z2_GEMAT
13_1_20cm_4_scaffold_198_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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14106..15371
DNA (1266bp) protein (422aa)
nuoD; NADH-quinone oxidoreductase chain D (EC:1.6.99.5); K00333 NADH-quinone oxidoreductase subunit D [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit D n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z1_GEMAT
NAD(P)H-quinone oxidoreductase subunit H
13_1_20cm_4_scaffold_198_15
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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15368..15862
DNA (495bp) protein (165aa)
NADH-quinone oxidoreductase chain E n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Z0_GEMAT
NADH-quinone oxidoreductase, E subunit {ECO:0000313|EMBL:AHG90828.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NADH-quinone oxidoreductase, E subunit
13_1_20cm_4_scaffold_198_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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15862..17139
DNA (1278bp) protein (426aa)
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5); K00335 NADH-quinone oxidoreductase subunit F [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
nuoF; NADH-quinone oxidoreductase chain F (EC:1.6.99.5)
NADH-quinone oxidoreductase chain F n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y9_GEMAT
13_1_20cm_4_scaffold_198_17
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

17201..18553
DNA (1353bp) protein (451aa)
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein {ECO:0000313|EMBL:AHG90826.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein
NADH dehydrogenase I, G subunit id=2650504 bin=GWA2_Deltaproteo_65_63 species=Cystobacter fuscus genus=Cystobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_198_18
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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18550..19716
DNA (1167bp) protein (389aa)
nuoH; NADH-quinone oxidoreductase chain H (EC:1.6.99.5); K00337 NADH-quinone oxidoreductase subunit H [EC:1.6.5.3] Tax=GWC2_Gemmatimonadetes_71_10_curated
NADH-quinone oxidoreductase subunit H n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y7_GEMAT
NAD(P)H-quinone oxidoreductase subunit 1
13_1_20cm_4_scaffold_198_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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19716..20597
DNA (882bp) protein (294aa)
nuoI; NADH-quinone oxidoreductase chain I (EC:1.6.99.5); K00338 NADH-quinone oxidoreductase subunit I [EC:1.6.5.3] Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase subunit I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y6_GEMAT
NAD(P)H-quinone oxidoreductase subunit I
13_1_20cm_4_scaffold_198_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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20598..20894
DNA (297bp) protein (99aa)
nuoK; NADH dehydrogenase I subunit K (EC:1.6.5.3); K00340 NADH-quinone oxidoreductase subunit K [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH:ubiquinone oxidoreductase subunit K n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B6B929
NADH-ubiquinone oxidoreductase subunit 4L
13_1_20cm_4_scaffold_198_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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20896..22881
DNA (1986bp) protein (662aa)
nuoL; NADH-quinone oxidoreductase chain L (EC:1.6.99.5) Tax=RBG_16_Gemmatimonadetes_66_8_curated
NADH-quinone oxidoreductase chain L n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y3_GEMAT
proton-translocating NADH-quinone oxidoreductase, chain L
13_1_20cm_4_scaffold_198_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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22881..24386
DNA (1506bp) protein (502aa)
proton-translocating NADH-quinone oxidoreductase subunit M (EC:1.6.99.5); K00342 NADH-quinone oxidoreductase subunit M [EC:1.6.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
NADH dehydrogenase subunit M (EC:1.6.5.3)
NADH dehydrogenase I subunit M id=1250619 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
13_1_20cm_4_scaffold_198_23
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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24383..25879
DNA (1497bp) protein (499aa)
nuoN; NADH-quinone oxidoreductase chain N (EC:1.6.99.5); K00343 NADH-quinone oxidoreductase subunit N [EC:1.6.5.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
NADH-quinone oxidoreductase subunit N n=1 Tax=Desulfuromonas acetoxidans DSM 684 RepID=Q1K3U8_DESAC
NAD(P)H-quinone oxidoreductase subunit 2
13_1_20cm_4_scaffold_198_24
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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25879..27267
DNA (1389bp) protein (463aa)
manB; phosphomannomutase (EC:5.4.2.8); K15778 phosphomannomutase / phosphoglucomutase [EC:5.4.2.8 5.4.2.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Phosphomannomutase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A8Y0_GEMAT
phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I
13_1_20cm_4_scaffold_198_25
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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27272..29593
DNA (2322bp) protein (774aa)
UPF0182 protein HFX_6056 n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3RAC3_HALMT
protein of unknown function UPF0182
Tax=RBG_16_Gemmatimonadetes_66_8_curated
Displaying 25 items

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