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13_1_20cm_4_scaffold_2319

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2319_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3..1934
DNA (1932bp) protein (644aa)
priA; primosomal protein N'; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Primosomal protein N n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6V7_GEMAT
primosomal protein N
13_1_20cm_4_scaffold_2319_2
Corallococcus coralloides, Corallococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1945..3009
DNA (1065bp) protein (355aa)
Uncharacterized protein n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MZV0_CORCM
Uncharacterized protein {ECO:0000313|EMBL:AFE03460.1}; TaxID=1144275 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Corallococcus.;" source="Cor
hypothetical protein
13_1_20cm_4_scaffold_2319_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

2970..3380
DNA (411bp) protein (137aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_2319_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3370..3831
DNA (462bp) protein (154aa)
Fur family transcriptional regulator n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W1_GEMAT
Fur family transcriptional regulator; K03711 Fur family transcriptional regulator, ferric uptake regulator Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ferric-uptake regulator
13_1_20cm_4_scaffold_2319_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3851..4396
DNA (546bp) protein (182aa)
pdaD; pyruvoyl-dependent arginine decarboxylase; K02626 arginine decarboxylase [EC:4.1.1.19] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Pyruvoyl-dependent arginine decarboxylase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I2H1_CALAS
pdaD; pyruvoyl-dependent arginine decarboxylase
13_1_20cm_4_scaffold_2319_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

4393..5109
DNA (717bp) protein (239aa)
ccdA; cytochrome c-type biogenesis protein CcdA (EC:1.8.-.-); K06196 cytochrome c-type biogenesis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
ccdA; cytochrome c-type biogenesis protein CcdA (EC:1.8.-.-)
Cytochrome c-type biogenesis protein CcdA n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W2_GEMAT
13_1_20cm_4_scaffold_2319_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5216..5869
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_2319_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(5880..7697)
DNA (1818bp) protein (606aa)
Gamma-glutamyltranspeptidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
gamma-glutamyltransferase
13_1_20cm_4_scaffold_2319_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

7764..8699
DNA (936bp) protein (312aa)
hypothetical protein; K07106 N-acetylmuramic acid 6-phosphate etherase [EC:4.2.1.126] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
N-acetylmuramic acid 6-phosphate etherase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W7_GEMAT
N-acetylmuramic acid 6-phosphate etherase
13_1_20cm_4_scaffold_2319_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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8696..9817
DNA (1122bp) protein (374aa)
anmK; anhydro-N-acetylmuramic acid kinase; K09001 anhydro-N-acetylmuramic acid kinase [EC:2.7.1.170] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Anhydro-N-acetylmuramic acid kinase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L4J5_THERP id=5224368 bin=16ft_combo_ws3_JS1 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=16ft_combo_ws3_JS1 organism_group=Unknown_CP organism_desc=Cant place firmly withiin either WS3 or JS1. Part of a large Rifle clade
Anhydro-N-acetylmuramic acid kinase
13_1_20cm_4_scaffold_2319_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9814..11247
DNA (1434bp) protein (478aa)
glycosidase (EC:3.2.1.-); K05349 beta-glucosidase [EC:3.2.1.21] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Glycosidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6W9_GEMAT
glycoside hydrolase family 3 domain protein
13_1_20cm_4_scaffold_2319_12
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(11316..12689)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=planctomycete KSU-1 RepID=I3IQA9_9PLAN
FHA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_2319_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(12765..13562)
DNA (798bp) protein (266aa)
putative serine/threonine protein phosphatase (EC:3.1.3.16); K01090 protein phosphatase [EC:3.1.3.16] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative serine/threonine protein phosphatase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X0_GEMAT
protein phosphatase 2C domain protein
13_1_20cm_4_scaffold_2319_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(13565..15109)
DNA (1545bp) protein (515aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AA94_GEMAT
protein kinase
13_1_20cm_4_scaffold_2319_15
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(15106..16158)
DNA (1053bp) protein (351aa)
FHA domain containing protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IKZ4_ANADE
FHA domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
FHA domain-containing protein
13_1_20cm_4_scaffold_2319_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16269..18158
DNA (1890bp) protein (630aa)
putative N-acetylmuramoyl-L-alanine amidase; K01448 N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative N-acetylmuramoyl-L-alanine amidase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X1_GEMAT
cell wall hydrolase/autolysin
13_1_20cm_4_scaffold_2319_17
unknown

Not on your lists

comp(17987..18907)
DNA (921bp) protein (307aa)

This feature has no annotations

13_1_20cm_4_scaffold_2319_18
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

19356..20864
DNA (1509bp) protein (503aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
WD40-like beta Propeller containing protein
13_1_20cm_4_scaffold_2319_19
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20939..22816
DNA (1878bp) protein (626aa)
putative serine/threonine protein kinase; K11912 serine/threonine-protein kinase PpkA [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
serine/threonine protein kinase n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B765FC
protein kinase
13_1_20cm_4_scaffold_2319_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22860..23324
DNA (465bp) protein (155aa)
Isoleucine patch superfamily enzyme, carbonic anhydrase/acetyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DKR7_SINAD
carbonic anhydrase/acetyltransferase Tax=RBG_16_Gemmatimonadetes_66_8_curated
carbonic anhydrase/acetyltransferase
13_1_20cm_4_scaffold_2319_21
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

23491..24546
DNA (1056bp) protein (352aa)
nrdJ; ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1); K00525 ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Ribonucleoside-diphosphate reductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6X4_GEMAT
ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
Displaying 21 items

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