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13_1_20cm_4_scaffold_256

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_256_1
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..605)
DNA (603bp) protein (201aa)
Putative periplasmic substrate-binding protein n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LKR7_HALO1
Putative periplasmic substrate-binding protein {ECO:0000313|EMBL:ACY16637.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangiu
periplasmic substrate-binding protein
13_1_20cm_4_scaffold_256_2
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(618..1130)
DNA (513bp) protein (171aa)
hypothetical protein n=1 Tax=Rudaea cellulosilytica RepID=UPI00035CFF77
Uncharacterized protein {ECO:0000313|EMBL:EWS63591.1}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp
hypothetical protein
13_1_20cm_4_scaffold_256_3
Azospirillum lipoferum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1145..2473)
DNA (1329bp) protein (443aa)
Uncharacterized protein n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7Z499_AZOL4
Uncharacterized protein {ECO:0000313|EMBL:CBS86248.1}; TaxID=862719 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum li
hypothetical protein
13_1_20cm_4_scaffold_256_4
Luteibacter yeojuensis, Luteibacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2475..2795)
DNA (321bp) protein (107aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI000289BEFA
Uncharacterized protein {ECO:0000313|EMBL:KJV35201.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter yeojue
hypothetical protein
13_1_20cm_4_scaffold_256_5
RBG_16_Spirochaete_67_19_curated, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

2921..3178
DNA (258bp) protein (86aa)
hypothetical protein n=1 Tax=Nonomuraea coxensis RepID=UPI00036FF556
Zn-finger-containing protein Tax=RBG_16_Spirochaete_67_19_curated
hypothetical protein
13_1_20cm_4_scaffold_256_6
Indibacter alkaliphilus, Indibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(3165..3467)
DNA (303bp) protein (101aa)
GCN5-related N-acetyltransferase n=1 Tax=Indibacter alkaliphilus LW1 RepID=S2DLM2_9BACT
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EOZ99867.1}; TaxID=1189612 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae.;" source="Indibacter alkaliphilus LW1.;"
acetyltransferase-like protein
13_1_20cm_4_scaffold_256_7
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(3464..5119)
DNA (1656bp) protein (552aa)
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IQV1_KORVE
Cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ABF40749.1}; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
13_1_20cm_4_scaffold_256_8
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5175..5657)
DNA (483bp) protein (161aa)
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ADU50535.1}; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermae
13_1_20cm_4_scaffold_256_9
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5654..8812)
DNA (3159bp) protein (1053aa)
Cation/multidrug efflux pump n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C2F7_DESTA rbh
cation/multidrug efflux pump Tax=RBG_16_Anaeromyxobacter_69_14_curated
cation/multidrug efflux pump
13_1_20cm_4_scaffold_256_10
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8809..9906)
DNA (1098bp) protein (366aa)
RND family efflux transporter, MFP subunit n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4C2F6_DESTA
RND family efflux transporter, MFP subunit Tax=RBG_16_Anaeromyxobacter_69_14_curated
RND family efflux transporter, MFP subunit
13_1_20cm_4_scaffold_256_11
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9903..11228)
DNA (1326bp) protein (442aa)
Outer membrane efflux protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IK31_ANADE rbh
Outer membrane efflux protein {ECO:0000313|EMBL:ABC82008.1}; Flags: Precursor;; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacterace
outer membrane efflux protein
13_1_20cm_4_scaffold_256_12
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11321..12778
DNA (1458bp) protein (486aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; An
Histidine kinase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JC96_ANAD2
histidine kinase
13_1_20cm_4_scaffold_256_13
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12787..14169
DNA (1383bp) protein (461aa)
Two component, sigma54 specific, transcriptional regulator, Fis family n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UFA5_ANASK rbh
Two component, sigma54 specific, transcriptional regulator, Fis family {ECO:0000313|EMBL:ACG73639.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterinea
Fis family transcriptional regulator
13_1_20cm_4_scaffold_256_14
Chondromyces apiculatus, Chondromyces, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14345..15085
DNA (741bp) protein (247aa)
Uncharacterized protein {ECO:0000313|EMBL:EYF08580.1}; TaxID=1192034 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Chondromyces.;" source="Chondrom
hypothetical protein
13_1_20cm_4_scaffold_256_15
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15164..15673)
DNA (510bp) protein (170aa)
hypothetical protein n=1 Tax=Hyphomicrobium zavarzinii RepID=UPI0003793E31
Uncharacterized protein {ECO:0000313|EMBL:EGI75610.1}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gracilis
hypothetical protein
13_1_20cm_4_scaffold_256_16
Viridibacillus arenosi, Viridibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16095..16694
DNA (600bp) protein (200aa)
Acetoin utilization protein AcuA n=1 Tax=Desmospora sp. 8437 RepID=F5SFC2_9BACL
Acetyltransferase {ECO:0000313|EMBL:ETT82634.1}; TaxID=1227360 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Viridibacillus.;" source="Viridibacillus arenosi FSL R5-213.;"
acuA; acetoin utilization protein
13_1_20cm_4_scaffold_256_17
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

16779..17762
DNA (984bp) protein (328aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJK7_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK43581.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_4_scaffold_256_18
Mesorhizobium sp. UASWS1009, Mesorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17809..18462
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Nocardiopsis lucentensis RepID=UPI0003458E40
Contig118, whole genome shotgun sequence {ECO:0000313|EMBL:KIU55650.1}; TaxID=1566387 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="
DNA repair protein
13_1_20cm_4_scaffold_256_19
Streptomyces filamentosus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18459..19199
DNA (741bp) protein (247aa)
hypothetical protein n=1 Tax=Streptomyces sp. HmicA12 RepID=UPI00035CC530
Putative uncharacterized protein {ECO:0000313|EMBL:EFE74745.2}; TaxID=457431 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces roseosporus NR
hypothetical protein
13_1_20cm_4_scaffold_256_20
Nocardia brasiliensis, Nocardia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19256..19681
DNA (426bp) protein (142aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B1L9_STRRD
Putative RNA polymerase ECF-type sigma factor {ECO:0000313|EMBL:GAJ84708.1}; TaxID=1206724 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Nocardia.;" source="Nocardia brasiliensis
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_4_scaffold_256_21
Streptosporangium roseum, Streptosporangium, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19678..20289
DNA (612bp) protein (204aa)
Methylated-DNA--protein-cysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00772}; EC=2.1.1.63 {ECO:0000256|HAMAP-Rule:MF_00772};; 6-O-methylguanine-DNA methyltransferase {ECO:0000256|HAMAP-Rule:MF
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Streptosporangium roseum (strain ATCC 12428 / DSM 43021 / JCM 3005 / NI 9100) RepID=D2B1M0_STRRD
methylated DNA-protein cysteine methyltransferase-like protein
13_1_20cm_4_scaffold_256_22
unknown

Not on your lists

20354..21280
DNA (927bp) protein (309aa)

This feature has no annotations

13_1_20cm_4_scaffold_256_23
Intrasporangium oryzae, Intrasporangium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21267..23759)
DNA (2493bp) protein (831aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00037A40F1 rbh
Uncharacterized protein {ECO:0000313|EMBL:EWT00440.1}; TaxID=1386089 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Intrasporangium.;" source="Intrasporangium oryzae NRRL B-2447
hypothetical protein
Displaying 23 items

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