ggKbase home page

13_1_20cm_4_scaffold_257

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_257_1
unknown

Not on your lists

3..380
DNA (378bp) protein (126aa)

This feature has no annotations

13_1_20cm_4_scaffold_257_2

Not on your lists

comp(865..1338)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos26G2 RepID=Q64BQ1_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:AAU83176.1}; TaxID=285389 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos26G2.;"
13_1_20cm_4_scaffold_257_3
unknown

Not on your lists

comp(1459..1665)
DNA (207bp) protein (69aa)

This feature has no annotations

13_1_20cm_4_scaffold_257_4
unknown

Not on your lists

comp(1893..2081)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_4_scaffold_257_5

Not on your lists

comp(2343..5723)
DNA (3381bp) protein (1127aa)
Uncharacterized protein {ECO:0000313|EMBL:KKM88294.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_20cm_4_scaffold_257_6
unknown

Not on your lists

comp(6536..6781)
DNA (246bp) protein (82aa)

This feature has no annotations

13_1_20cm_4_scaffold_257_7
unknown

Not on your lists

comp(7501..8097)
DNA (597bp) protein (199aa)

This feature has no annotations

13_1_20cm_4_scaffold_257_8
unknown

Not on your lists

comp(8131..8319)
DNA (189bp) protein (63aa)

This feature has no annotations

13_1_20cm_4_scaffold_257_9
unknown

Not on your lists

comp(8470..8967)
DNA (498bp) protein (166aa)

This feature has no annotations

13_1_20cm_4_scaffold_257_10
unknown

Not on your lists

comp(9050..9391)
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_20cm_4_scaffold_257_11
unknown

Not on your lists

comp(9667..9924)
DNA (258bp) protein (86aa)

This feature has no annotations

13_1_20cm_4_scaffold_257_12
Thermincola potens, Thermincola, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10457..11365)
DNA (909bp) protein (303aa)
DNA polymerase LigD, polymerase domain protein n=1 Tax=Thermincola potens (strain JR) RepID=D5XFI5_THEPJ
DNA polymerase LigD, polymerase domain protein {ECO:0000313|EMBL:ADG82406.1}; TaxID=635013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Thermincola.;" source="Thermincola
DNA polymerase LigD, polymerase domain-containing protein
13_1_20cm_4_scaffold_257_13
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

11585..12262
DNA (678bp) protein (226aa)
Probable DNA repair protein AF_1726 n=2 Tax=Archaeoglobus fulgidus RepID=Y1726_ARCFU
Non-homologous end joining protein Ku {ECO:0000256|HAMAP-Rule:MF_01875}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archae
Ku protein, prokaryotic
13_1_20cm_4_scaffold_257_14
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

12292..13224
DNA (933bp) protein (311aa)
DNA polymerase LigD, ligase domain protein (EC:6.5.1.1)
DNA ligase, putative n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O28549_ARCFU
DNA ligase, putative {ECO:0000313|EMBL:AAB89526.1}; TaxID=224325 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobus fulgidus (stra
13_1_20cm_4_scaffold_257_15
RBG_16_Bathyarchaeota_48_13_curated, Bathyarchaeota, Archaea

Not on your lists

13818..14078
DNA (261bp) protein (87aa)
Elongation factor 1-beta n=1 Tax=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) RepID=EF1B_STAMF
ef1B; elongation factor 1-beta; K03232 elongation factor 1-beta Tax=RBG_16_Bathyarchaeota_48_13_curated
ef1B; elongation factor 1-beta
13_1_20cm_4_scaffold_257_16
unknown

Not on your lists

14144..14581
DNA (438bp) protein (146aa)

This feature has no annotations

13_1_20cm_4_scaffold_257_17
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

14674..16074
DNA (1401bp) protein (467aa)
ATPase AAA n=1 Tax=Thermofilum sp. 1910b RepID=S5ZK36_9CREN
ATPase AAA Tax=RBG_16_Archaea_50_20_curated
ATPase AAA
13_1_20cm_4_scaffold_257_18
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

16049..16720
DNA (672bp) protein (224aa)
AAA family ATPase, CDC48 subfamily n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TTA3_9ARCH
ATPase AAA Tax=RBG_13_Bathyarchaeota_38_9_curated
ATPase AAA
13_1_20cm_4_scaffold_257_19
RBG_13_Bathyarchaeota_38_9_curated, Bathyarchaeota, Archaea

Not on your lists

16787..16993
DNA (207bp) protein (69aa)
Tax=RBG_13_Bathyarchaeota_38_9_curated
13_1_20cm_4_scaffold_257_20
Methanosaeta harundinacea, Methanosaeta, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

17040..17372
DNA (333bp) protein (111aa)
Thioredoxin n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WMW2_METH6
Thioredoxin {ECO:0000313|EMBL:AET64527.1}; TaxID=1110509 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosaetaceae; Methanosaeta.;" source="Methanosaeta harundinacea (strai
Thioredoxin
13_1_20cm_4_scaffold_257_21
RBG_16_Thaumarchaeota_49_8_curated, Thaumarchaeota, TACK, Archaea

Not on your lists

17495..18544
DNA (1050bp) protein (350aa)
Phosphate regulatory protein n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N322_9ARCH
phosphate regulatory protein Tax=RBG_16_Thaumarchaeota_49_8_curated
phosphate regulatory protein
Displaying 21 items

View Taxonomy