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13_1_20cm_4_scaffold_2604

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2604_1
unknown

Not on your lists

comp(2..337)
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_20cm_4_scaffold_2604_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(277..786)
DNA (510bp) protein (170aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A951_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_2604_3
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(783..1580)
DNA (798bp) protein (266aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAAS00247609}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158, ECO:0000256|SAAS:SAA
pantothenate synthetase (EC:6.3.2.1)
Pantothenate synthetase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SG80_THEM7
13_1_20cm_4_scaffold_2604_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(1668..1844)
DNA (177bp) protein (59aa)
Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
13_1_20cm_4_scaffold_2604_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1885..2688)
DNA (804bp) protein (268aa)
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11); K00606 3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11] Tax=GWC2_Gemmatimonadetes_71_10_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W3R1_DESIS
13_1_20cm_4_scaffold_2604_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2681..3100)
DNA (420bp) protein (140aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=RIFCSPLOWO2_12_FULL_Gemmatim
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase n=1 Tax=Oceanithermus profundus (strain DSM 14977 / NBRC 100410 / VKM B-2274 / 506) RepID=E4U4X5_OCEP5
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_20cm_4_scaffold_2604_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3106..5190)
DNA (2085bp) protein (695aa)
Methyl-accepting chemotaxis protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67QH5_SYMTH
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_20cm_4_scaffold_2604_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5187..5960)
DNA (774bp) protein (258aa)
trpA; tryptophan synthase alpha chain (EC:4.2.1.20); K01695 tryptophan synthase alpha chain [EC:4.2.1.20] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
trpA; tryptophan synthase alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A952_GEMAT
13_1_20cm_4_scaffold_2604_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5953..6582)
DNA (630bp) protein (210aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A953_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_2604_10
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(6564..7286)
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A953_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_2604_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7283..9007)
DNA (1725bp) protein (575aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A954_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_2604_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9067..10248)
DNA (1182bp) protein (394aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium
Tryptophan synthase beta chain n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A955_GEMAT
Tryptophan synthase beta chain
13_1_20cm_4_scaffold_2604_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(10241..11044)
DNA (804bp) protein (268aa)
indole-3-glycerol-phosphate synthase (EC:4.1.1.48); K01609 indole-3-glycerol phosphate synthase [EC:4.1.1.48] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Indole-3-glycerol phosphate synthase n=1 Tax=Desmospora sp. 8437 RepID=F5SBJ2_9BACL
Indole-3-glycerol phosphate synthase
13_1_20cm_4_scaffold_2604_14
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11103..11711
DNA (609bp) protein (203aa)
lexA; LexA repressor (EC:3.4.21.88); K01356 repressor LexA [EC:3.4.21.88] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
lexA; LexA repressor (EC:3.4.21.88)
LexA repressor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U3_GEMAT
13_1_20cm_4_scaffold_2604_15
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(11698..12963)
DNA (1266bp) protein (422aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=379066 spe
trpD; anthranilate phosphoribosyltransferase (EC:2.4.2.18)
Anthranilate phosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U4_GEMAT
13_1_20cm_4_scaffold_2604_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

13439..14107
DNA (669bp) protein (223aa)
transaldolase; K00616 transaldolase [EC:2.2.1.2] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
putative translaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RIA2_METVM
13_1_20cm_4_scaffold_2604_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

14149..15510
DNA (1362bp) protein (454aa)
Adenylosuccinate lyase n=1 Tax=uncultured planctomycete RepID=H5SIH7_9BACT
adenylosuccinate lyase Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
adenylosuccinate lyase
13_1_20cm_4_scaffold_2604_18
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

15507..16424
DNA (918bp) protein (306aa)
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6); K01923 phosphoribosylaminoimidazole-succinocarboxamide synthase [EC:6.3.2.6] Tax=RBG_16_Acidobacteria_68_9_curated
purC; phosphoribosylaminoimidazole-succinocarboxamide synthase (EC:6.3.2.6)
Phosphoribosylaminoimidazole-succinocarboxamide synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3U9_GEMAT
13_1_20cm_4_scaffold_2604_19
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

16421..17071
DNA (651bp) protein (217aa)
psd; phosphatidylserine decarboxylase (EC:4.1.1.65); K01613 phosphatidylserine decarboxylase [EC:4.1.1.65] Tax=GWC2_Gemmatimonadetes_71_10_curated
Phosphatidylserine decarboxylase proenzyme n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V0_GEMAT
Phosphatidylserine decarboxylase proenzyme
13_1_20cm_4_scaffold_2604_20
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

17068..17778
DNA (711bp) protein (237aa)
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8); K00998 phosphatidylserine synthase [EC:2.7.8.8] Tax=RBG_16_Acidobacteria_68_9_curated
pssA; CDP-diacylglycerol--serine O-phosphatidyltransferase (EC:2.7.8.8)
CDP-diacylglycerol--serine O-phosphatidyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V1_GEMAT
13_1_20cm_4_scaffold_2604_21
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

17805..18026
DNA (222bp) protein (74aa)
purS; phosphoribosylformylglycinamidine synthase (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Acidobacteria_68_9_curated
Phosphoribosylformylglycinamidine synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V2_GEMAT
phosphoribosylformylglycinamidine synthase, purS
13_1_20cm_4_scaffold_2604_22
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

18008..18724
DNA (717bp) protein (239aa)
phosphoribosylformylglycinamidine synthase I (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Acidobacteria_68_9_curated
phosphoribosylformylglycinamidine synthase subunit I (EC:6.3.5.3)
Phosphoribosylformylglycinamidine synthase 1 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=PURQ_RUBXD
13_1_20cm_4_scaffold_2604_23
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

18790..19131
DNA (342bp) protein (114aa)
Tax=RBG_16_Acidobacteria_68_9_curated
13_1_20cm_4_scaffold_2604_24
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

19128..19442
DNA (315bp) protein (105aa)
hypothetical protein; K09981 hypothetical protein Tax=RBG_16_Acidobacteria_68_9_curated
Uncharacterized protein id=4062238 bin=GWC2_Syntrophus__56_31 species=Corallococcus coralloides genus=Corallococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Syntrophus__56_31 organism_group=Deltaproteobacteria organism_desc=Good +
hypothetical protein
13_1_20cm_4_scaffold_2604_25
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

19439..21688
DNA (2250bp) protein (750aa)
purL; phosphoribosylformylglycinamidine synthase II (EC:6.3.5.3); K01952 phosphoribosylformylglycinamidine synthase [EC:6.3.5.3] Tax=RBG_16_Acidobacteria_68_9_curated
Phosphoribosylformylglycinamidine synthase 2 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V4_GEMAT
Phosphoribosylformylglycinamidine synthase 2
13_1_20cm_4_scaffold_2604_26
RBG_16_Acidobacteria_68_9_curated, Acidobacteria, Bacteria

Not on your lists

21696..21944
DNA (249bp) protein (83aa)
amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RBG_16_Acidobacteria_68_9_curated
purF; amidophosphoribosyltransferase (EC:2.4.2.14)
Amidophosphoribosyltransferase id=4682880 bin=GWA2_Deltaproteo_65_63 species=Desulfuromonas acetoxidans genus=Desulfuromonas taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Deltaproteo_65_63 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_2604_27
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

22034..22951
DNA (918bp) protein (306aa)
purF; amidophosphoribosyltransferase (EC:2.4.2.14); K00764 amidophosphoribosyltransferase [EC:2.4.2.14] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Amidophosphoribosyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A3V5_GEMAT
amidophosphoribosyltransferase
13_1_20cm_4_scaffold_2604_28
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

22977..23669
DNA (693bp) protein (231aa)
pyruvate phosphate dikinase (EC:2.7.9.1); K01006 pyruvate,orthophosphate dikinase [EC:2.7.9.1] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
pyruvate phosphate dikinase (EC:2.7.9.1)
Pyruvate, phosphate dikinase n=1 Tax=Treponema lecithinolyticum ATCC 700332 RepID=U2LYY1_TRELE
Displaying 28 items

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