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13_1_20cm_4_scaffold_261

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_261_1
RBG_19FT_COMBO_Aminicenantes_58_17_curated, Aminicenantes, Bacteria

Not on your lists

1..519
DNA (519bp) protein (173aa)
YcbU protein Tax=RBG_19FT_COMBO_Aminicenantes_58_17_curated
YcbU protein id=24517333 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Clostridium hylemonae genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
class V aminotransferase
13_1_20cm_4_scaffold_261_2
Acidimicrobium ferrooxidans, Acidimicrobium, Acidimicrobiales, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists


comp(575..973)
DNA (399bp) protein (133aa)
50S ribosomal protein L7/L12 n=1 Tax=Acidimicrobium ferrooxidans (strain DSM 10331 / JCM 15462 / NBRC 103882 / ICP) RepID=C7M2W4_ACIFD
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=525909 species="Bacteria; Actinobacteria; Acidimicrobiia; Acidimicrobiales; Acidimicrobiaceae; Acidimicrobium.;" source="Acidimicr
50S ribosomal protein L7/L12
13_1_20cm_4_scaffold_261_3
RBG_13_Chloroflexi_56_8b_curated, Chloroflexi, Bacteria

Not on your lists


comp(976..1509)
DNA (534bp) protein (178aa)
50S ribosomal protein L10 n=1 Tax=Acetonema longum DSM 6540 RepID=F7NIA2_9FIRM
50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RBG_13_Chloroflexi_56_8b_curated
50S ribosomal protein L10
13_1_20cm_4_scaffold_261_4
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

comp(1640..2182)
DNA (543bp) protein (181aa)
GCN5-related N-acetyltransferase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDN6_THET1
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:ACZ41042.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 / YNP1).;"
N-acetyltransferase GCN5
13_1_20cm_4_scaffold_261_5
CSP1_4_Chloroflexi, Gitt-GS-136, Chloroflexi, Bacteria

Not on your lists


comp(2213..2944)
DNA (732bp) protein (244aa)
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=CSP1_4_Chloroflexi
50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 id=14630125 bin=bin8_Chloro species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin8_Chloro organism_group=Chloroflexi
50S ribosomal protein L1
Novel Jill Banfield (10/17/14)
13_1_20cm_4_scaffold_261_6
RBG_16_RIF_CHLX_69_14_curated, RIF-CHLX, Bacteria

Not on your lists


comp(2944..3372)
DNA (429bp) protein (143aa)
rplK; 50S ribosomal protein L11; K02867 large subunit ribosomal protein L11 Tax=RBG_16_RIF_CHLX_69_14_curated
50S ribosomal protein L11 id=4877450 bin=GWC2_Chloroflexi_73_18 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
rplK; 50S ribosomal protein L11
13_1_20cm_4_scaffold_261_7
S_Thermacetogenium_phaeum_55_64, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3394..3957)
DNA (564bp) protein (188aa)
Transcription termination/antitermination protein NusG n=1 Tax=Thermacetogenium phaeum (strain ATCC BAA-254 / DSM 12270 / PB) RepID=K4LIV4_THEPS
Transcription termination/antitermination protein nusG Tax=S_Thermacetogenium_phaeum_55_64
nusG; transcription antitermination protein NusG
13_1_20cm_4_scaffold_261_8
R_OP11_Levybacteria_41_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(3957..4196)
DNA (240bp) protein (80aa)
Preprotein translocase subunit SecE (TC 3.A.5.1.1); K03073 preprotein translocase subunit SecE Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_41_15_curated
13_1_20cm_4_scaffold_261_9
R_NC10_66_22, NC10, Bacteria

Not on your lists


comp(4196..4345)
DNA (150bp) protein (50aa)
ribosomal protein L33; K02913 large subunit ribosomal protein L33 Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
rpmG; 50S ribosomal protein L33; K02913 large subunit ribosomal protein L33 id=24458185 bin=RBG_19FT_COMBO_GAL15_69_19 species=unknown genus=Slackia taxon_order=Coriobacteriales taxon_class=Actinobacteria phylum=Actinobacteria tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
rpmG; 50S ribosomal protein L33
13_1_20cm_4_scaffold_261_10
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

comp(4430..5077)
DNA (648bp) protein (216aa)
TetR family transcriptional regulator n=1 Tax=Actinoplanes globisporus RepID=UPI0003603CF8
putative transcriptional regulator, TetR family Tax=CG_Anaero_04
putative TetR-family transcriptional regulator
13_1_20cm_4_scaffold_261_11
Kibdelosporangium sp. MJ126-NF4, Kibdelosporangium, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5141..5581
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Gordonia rhizosphera NBRC 16068 RepID=K6WUP1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:CEL18400.1}; TaxID=703222 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Kibdelosporangium.;" source="Kibdelosporangium sp. MJ126-N
hypothetical protein
13_1_20cm_4_scaffold_261_12
Herpetosiphon aurantiacus, Herpetosiphon, Herpetosiphonales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

5619..6719
DNA (1101bp) protein (367aa)
Isocitrate/isopropylmalate dehydrogenase n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B5G0_HERA2
Isocitrate/isopropylmalate dehydrogenase {ECO:0000313|EMBL:ABX02785.1}; TaxID=316274 species="Bacteria; Chloroflexi; Chloroflexia; Herpetosiphonales; Herpetosiphonaceae; Herpetosiphon.;" source="Herpe
isocitrate/isopropylmalate dehydrogenase
13_1_20cm_4_scaffold_261_13
RBG_16_RIF_CHLX_70_13_curated, RIF-CHLX, Bacteria

Not on your lists

6716..7303
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9F9E9_SORC5
lipolytic protein G-D-S-L family Tax=RBG_16_RIF_CHLX_70_13_curated
hypothetical protein
13_1_20cm_4_scaffold_261_14
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(7293..7979)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA027-M14 RepID=UPI0003772551
LmbE family protein {ECO:0000313|EMBL:ACZ39625.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="S
LmbE family protein
13_1_20cm_4_scaffold_261_15
unknown

Not on your lists

comp(8088..9938)
DNA (1851bp) protein (617aa)

This feature has no annotations

13_1_20cm_4_scaffold_261_16
S_Thermoanaerobacterales_50_218, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9978..11390)
DNA (1413bp) protein (471aa)
Pyruvate kinase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D051_PELTS
Pyruvate kinase Tax=S_Thermoanaerobacterales_50_218
PykF; pyruvate kinase
13_1_20cm_4_scaffold_261_17
BJP_08E140C01_Clostridiales_46_19, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11387..11824)
DNA (438bp) protein (146aa)
hypothetical protein n=1 Tax=Alicyclobacillus pohliae RepID=UPI000368C3AC
hypothetical protein
Tax=BJP_08E140C01_Clostridiales_46_19
13_1_20cm_4_scaffold_261_18
Thermomonospora curvata, Thermomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11830..13104)
DNA (1275bp) protein (425aa)
Peptidase M50 n=1 Tax=Thermomonospora curvata (strain ATCC 19995 / DSM 43183 / JCM 3096 / NCIMB 10081) RepID=D1AE09_THECD
Peptidase M50 {ECO:0000313|EMBL:ACY99435.1}; TaxID=471852 species="Bacteria; Actinobacteria; Streptosporangiales; Thermomonosporaceae; Thermomonospora.;" source="Thermomonospora curvata (strain ATCC 1
peptidase M50
13_1_20cm_4_scaffold_261_19
Candidatus Desulforudis audaxviator, Candidatus Desulforudis, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13114..13830)
DNA (717bp) protein (239aa)
RNA methyltransferase, TrmH family, group 3 n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I0T3_DESAP
RNA methyltransferase, TrmH family, group 3 {ECO:0000313|EMBL:ACA58754.1}; TaxID=477974 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Candidatus Desulforudis.;" source="Des
RNA methyltransferase
13_1_20cm_4_scaffold_261_20
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

Not on your lists

13845..14360
DNA (516bp) protein (172aa)
hypothetical protein Tax=RBG_16_OP11_45_19_curated
13_1_20cm_4_scaffold_261_21
RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(14363..15784)
DNA (1422bp) protein (474aa)
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_59_11_curated
cysS; cysteinyl-tRNA synthetase (EC:6.1.1.16)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 96 RepID=UPI0003762C01
13_1_20cm_4_scaffold_261_22
unknown

Not on your lists

comp(15790..15945)
DNA (156bp) protein (52aa)

This feature has no annotations

Displaying 22 items

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