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13_1_20cm_4_scaffold_2643

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2643_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

1..567
DNA (567bp) protein (189aa)
Uncharacterised conserved protein UCP016719 n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYD0_RUBXD
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_2643_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

602..1300
DNA (699bp) protein (233aa)
putative phosphatidylinositol synthase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative phosphatidylinositol synthase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A963_GEMAT
CDP-alcohol phosphatidyltransferase
13_1_20cm_4_scaffold_2643_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1303..2631
DNA (1329bp) protein (443aa)
inositol-3-phosphate synthase (EC:5.5.1.4); K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein n=1 Tax=Catelliglobosispora koreensis RepID=UPI000362AE6E
Myo-inositol-1-phosphate synthase
13_1_20cm_4_scaffold_2643_4
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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2628..3053
DNA (426bp) protein (142aa)
copper-binding protein n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B761CF
Cupredoxin-like domain {ECO:0000313|EMBL:CDM64284.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
hypothetical protein
13_1_20cm_4_scaffold_2643_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3046..5595
DNA (2550bp) protein (850aa)
copper-translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
copA; copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4)
Copper-(Or silver)-translocating P-type ATPase n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I6E8_METCZ rbh
13_1_20cm_4_scaffold_2643_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

5592..5882
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A960_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_2643_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(5879..6094)
DNA (216bp) protein (72aa)
Conserved domain protein n=4 Tax=Listeria innocua RepID=E3Z0C8_LISIO
putative mercuric ion binding protein; K07213 copper chaperone Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_2643_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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6178..7233
DNA (1056bp) protein (352aa)
pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type subunit alpha (EC:1.2.4.1); K00166 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]
Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHD8_CHLTF
dehydrogenase E1 component
13_1_20cm_4_scaffold_2643_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

7233..8213
DNA (981bp) protein (327aa)
branched-chain alpha-keto acid dehydrogenase E1 component (EC:1.2.4.1); K00167 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Branched-chain alpha-keto acid dehydrogenase E1 component n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LH09_CHLTF
Transketolase central region
13_1_20cm_4_scaffold_2643_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

8223..8666
DNA (444bp) protein (148aa)
dihydrolipoamide acyltransferase (EC:2.3.1.-); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_cura
Dihydrolipoamide acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A958_GEMAT
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
13_1_20cm_4_scaffold_2643_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

8743..9393
DNA (651bp) protein (217aa)
dihydrolipoamide acyltransferase (EC:2.3.1.-); K00658 2-oxoglutarate dehydrogenase E2 component (dihydrolipoamide succinyltransferase) [EC:2.3.1.61] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curat
2-oxoglutarate dehydrogenase E2 component n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IIF0_KORVE
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase
13_1_20cm_4_scaffold_2643_12
RBG_16_Actinobacteria_67_10_curated, Acidimicrobiia, Actinobacteria, Bacteria

Not on your lists

9395..9709
DNA (315bp) protein (105aa)
Tax=RBG_16_Actinobacteria_67_10_curated
13_1_20cm_4_scaffold_2643_13
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

9718..9987
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A956_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_2643_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

9968..10843
DNA (876bp) protein (292aa)
PHP domain protein n=1 Tax=Desulfarculus baarsii (strain ATCC 33931 / DSM 2075 / VKM B-1802 / 2st14) RepID=E1QEI7_DESB2
hypothetical protein; K07053 Tax=RBG_16_Gemmatimonadetes_66_8_curated
PHP domain protein
13_1_20cm_4_scaffold_2643_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

10840..10983
DNA (144bp) protein (48aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_2643_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11014..11280
DNA (267bp) protein (89aa)
peroxiredoxin (EC:1.11.1.15); K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DTB7_9BACL
alkyl hydroperoxide reductase
13_1_20cm_4_scaffold_2643_17
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11270..11995
DNA (726bp) protein (242aa)
Short-chain dehydrogenase/reductase n=1 Tax=uncultured gamma proteobacterium RepID=H5SE57_9GAMM
fabG10; 3-oxoacyl-ACP reductase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_2643_18
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12010..12768
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A4K5_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:BAH39030.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
hypothetical protein
13_1_20cm_4_scaffold_2643_19
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

12837..13193
DNA (357bp) protein (119aa)
Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
13_1_20cm_4_scaffold_2643_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

13193..14458
DNA (1266bp) protein (422aa)
TrxB2; thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=RBG_16_Gemmatimonadetes_66_8_curated
trxB; thioredoxin-disulfide reductase (EC:1.8.1.9)
thioredoxin reductase n=1 Tax=Sporolactobacillus vineae RepID=UPI000287D224
13_1_20cm_4_scaffold_2643_21
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14424..14654
DNA (231bp) protein (77aa)
beta-lactamase domain-containing protein (EC:3.1.2.6)
hypothetical protein n=1 Tax=Hydrogenedentes bacterium JGI 0000039-J10 RepID=UPI00037037BE
beta-lactamase domain-containing protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_2643_22
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14780..15301
DNA (522bp) protein (174aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AEB4_GEMAT
Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical membrane protein
Displaying 22 items

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