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13_1_20cm_4_scaffold_268

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_268_1
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

3..176
DNA (174bp) protein (58aa)
branched-chain amino acid aminotransferase (EC:2.6.1.42); K00826 branched-chain amino acid aminotransferase [EC:2.6.1.42] Tax=GWC2_Gemmatimonadetes_71_10_curated
branched-chain amino acid aminotransferase (EC:2.6.1.42)
branched-chain amino acid aminotransferase n=1 Tax=Schlesneria paludicola RepID=UPI00029B04BE
13_1_20cm_4_scaffold_268_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

505..756
DNA (252bp) protein (84aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_268_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

766..1167
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U4_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_268_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

1164..2720
DNA (1557bp) protein (519aa)
transglycosylase, slt family; K08307 membrane-bound lytic murein transglycosylase D [EC:3.2.1.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Lytic transglycosylase, catalytic id=3894255 bin=GWC2_Proteo_65_14_Ab886 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Proteo_65_14_Ab886 organism_group=Deltaproteobacteria
Lytic transglycosylase catalytic
13_1_20cm_4_scaffold_268_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(2738..3385)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U2_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Lytic transglycosylase catalytic
13_1_20cm_4_scaffold_268_6
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3448..3909)
DNA (462bp) protein (154aa)
Cyclic pyranopterin monophosphate synthase accessory protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U1_GEMAT
molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Molybdenum cofactor biosynthesis C, bacterial-type
13_1_20cm_4_scaffold_268_7
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(3906..4898)
DNA (993bp) protein (331aa)
holB; DNA polymerase III delta' subunit (EC:2.7.7.7); K02341 DNA polymerase III subunit delta' [EC:2.7.7.7] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
DNA polymerase III delta' subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9U0_GEMAT
DNA polymerase III delta' subunit
13_1_20cm_4_scaffold_268_8
unknown

Not on your lists

comp(5041..5457)
DNA (417bp) protein (139aa)

This feature has no annotations

13_1_20cm_4_scaffold_268_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5454..6983)
DNA (1530bp) protein (510aa)
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative uncharacterized protein id=2288737 bin=GWB2_Deltaproteobacteria_65_81 species=uncultured Desulfobacterium sp. genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Deltaproteobacteria_65_81 organism_group=Deltaproteobacteria organism_desc=Good +
PAS sensor protein
13_1_20cm_4_scaffold_268_10
RBG_16_Chloroflexi_56_8_curated, Chloroflexi, Bacteria

Not on your lists

comp(7312..7977)
DNA (666bp) protein (222aa)
response regulator Tax=RBG_16_Chloroflexi_56_8_curated
response regulator id=14429259 bin=bin3_NC10 species=unknown genus=unknown taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
response regulator receiver, LuxR family
13_1_20cm_4_scaffold_268_11
Ralstonia sp. GA3-3, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7974..8591)
DNA (618bp) protein (206aa)
h16_A0780; signal transduction histidine kinase (EC:2.7.3.-)
Signal transduction histidine kinase containing PAS/PAC sensor domain n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0KDJ4_CUPNH
Signal transduction histidine kinase {ECO:0000313|EMBL:EON17838.1}; TaxID=1229514 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralston
13_1_20cm_4_scaffold_268_12
Gallionella capsiferriformans, Gallionella, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8584..9312)
DNA (729bp) protein (243aa)
hypothetical protein n=1 Tax=Methylovulum miyakonense RepID=UPI00035C57BB
Diguanylate cyclase with PAS/PAC sensor {ECO:0000313|EMBL:ADL55878.1}; TaxID=395494 species="Bacteria; Proteobacteria; Betaproteobacteria; Gallionellales; Gallionellaceae; Gallionella.;" source="Galli
PAS/PAC sensor-containing diguanylate cyclase
13_1_20cm_4_scaffold_268_13
Candidatus Koribacter versatilis, Candidatus Koribacter, Acidobacteriales, Acidobacteriia, Acidobacteria, Bacteria

Not on your lists

comp(9332..11887)
DNA (2556bp) protein (852aa)
Multi-sensor hybrid histidine kinase {ECO:0000313|EMBL:ABF42015.1}; EC=2.7.13.3 {ECO:0000313|EMBL:ABF42015.1};; TaxID=204669 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Cand
Multi-sensor hybrid histidine kinase n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1IM85_KORVE
multi-sensor hybrid histidine kinase
13_1_20cm_4_scaffold_268_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

11977..14802
DNA (2826bp) protein (942aa)
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Multi-sensor hybrid histidine kinase id=4193472 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Koribacter versatilis genus=Candidatus Koribacter taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
multi-sensor hybrid histidine kinase
13_1_20cm_4_scaffold_268_15
Azospirillum thiophilum, Azospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14889..15278
DNA (390bp) protein (130aa)
Response regulator receiver domain n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQ08_SYNAS
Regulator {ECO:0000313|EMBL:KJR63066.1}; TaxID=528244 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Azospirillum.;" source="Azospirillum thiophilum.;"
response regulator receiver domain-containing protein
13_1_20cm_4_scaffold_268_16
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

Not on your lists

comp(15262..16323)
DNA (1062bp) protein (354aa)
hypothetical protein Tax=GWF2_Lentisphaerae_57_35_curated
Putative uncharacterized protein id=4483618 bin=GWF2_Lentisphaerae_57_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
hypothetical protein
13_1_20cm_4_scaffold_268_17
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(16400..17749)
DNA (1350bp) protein (450aa)
GHMP kinase n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CH81_THET1
Galactokinase {ECO:0000313|EMBL:CDM64829.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
GHMP kinase
13_1_20cm_4_scaffold_268_18
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(17746..18729)
DNA (984bp) protein (328aa)
Inositol monophosphatase n=1 Tax=Oscillochloris trichoides DG-6 RepID=E1IEX0_9CHLR
Inositol monophosphatase/fructose-1,6-bisphosphatase family protein {ECO:0000313|EMBL:CDM64830.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Py
inositol monophosphatase
13_1_20cm_4_scaffold_268_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

Not on your lists

comp(18731..19762)
DNA (1032bp) protein (344aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyr
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
Galactose-1-phosphate uridylyltransferase n=1 Tax=Ktedonobacter racemifer DSM 44963 RepID=D6TTA9_9CHLR
13_1_20cm_4_scaffold_268_20
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

19811..20965
DNA (1155bp) protein (385aa)
Xylose isomerase {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609}; EC=5.3.1.5 {ECO:0000256|HAMAP-Rule:MF_00455, ECO:0000256|RuleBase:RU000609};; TaxID=861299 species="Bacteria; Gemmati
Xylose isomerase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N0Z5_ANATU
Xylose isomerase
13_1_20cm_4_scaffold_268_21
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

21001..22440
DNA (1440bp) protein (480aa)
Xylulokinase n=1 Tax=Planctomyces brasiliensis (strain ATCC 49424 / DSM 5305 / JCM 21570 / NBRC 103401 / IFAM 1448) RepID=F0SIC9_PLABD
Xylulokinase {ECO:0000313|EMBL:AHG92041.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
xylulokinase
13_1_20cm_4_scaffold_268_22
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

22400..22927
DNA (528bp) protein (176aa)
beta-glucosidase n=1 Tax=Thermophagus xiamenensis RepID=UPI000255DC0D
Glycoside hydrolase family 3 domain protein {ECO:0000313|EMBL:AHG88100.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
glycoside hydrolase family 3 domain protein
13_1_20cm_4_scaffold_268_23
R_Ignavibacteria_55_14, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

Not on your lists

23443..24348
DNA (906bp) protein (302aa)
Na+/glucose cotransporter Tax=RIFCSPLOWO2_02_FULL_Ignavibacteria_55_14_curated
Na+/glucose cotransporter id=2725105 bin=GWC2_Ignavibacteria_56_12 species=Rhodopirellula sp. SWK7 genus=Rhodopirellula taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
Na+/glucose cotransporter
Displaying 23 items

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