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13_1_20cm_4_scaffold_2994

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_2994_1
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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1..2262
DNA (2262bp) protein (754aa)
deoxyhypusine synthase-like protein; K00809 deoxyhypusine synthase [EC:2.5.1.46] id=24490458 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Gloeobacter violaceus genus=Gloeobacter taxon_order=Gloeobacterales taxon_class=Gloeobacteria phylum=Cyanobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
major facilitator family transporter Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
deoxyhypusine synthase-like protein
13_1_20cm_4_scaffold_2994_2
RLO_Deltaproteobacteria_57_22, Deltaproteobacteria, Proteobacteria, Bacteria

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2279..3286
DNA (1008bp) protein (336aa)
D-alanine--D-alanine ligase; K01921 D-alanine-D-alanine ligase [EC:6.3.2.4] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated
ddlA; D-alanine-D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase domain protein n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZNS5_OPITP
13_1_20cm_4_scaffold_2994_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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3279..4286
DNA (1008bp) protein (336aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_2994_4
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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4351..5112
DNA (762bp) protein (254aa)
PBS lyase HEAT domain protein repeat-containing protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B7C6_METTP
Peptidase M56 BlaR1 {ECO:0000313|EMBL:AHG87780.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
peptidase M56 BlaR1
13_1_20cm_4_scaffold_2994_5
RBG_16_Desulfobacca_58_9_curated, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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5096..5593
DNA (498bp) protein (166aa)
Alpha-Rep4 n=1 Tax=synthetic construct RepID=UPI0001E5ECAE
PBS lyase HEAT domain-containing protein Tax=RBG_16_Desulfobacca_58_9_curated
peptidase M56 BlaR1
13_1_20cm_4_scaffold_2994_6
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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comp(5652..6347)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PIZ7_CHIPD
Uncharacterized protein {ECO:0000313|EMBL:ACU60081.1}; Flags: Precursor;; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source=
hypothetical protein
13_1_20cm_4_scaffold_2994_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

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comp(6379..6975)
DNA (597bp) protein (199aa)
Putative Quinol-cytochrome c reductase, cytochrome c subunit {ECO:0000313|EMBL:CBK43558.1}; EC=1.10.2.2 {ECO:0000313|EMBL:CBK43558.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitr
putative quinol-cytochrome c reductase cytochrome c subunit (EC:1.10.2.2)
hypothetical protein n=1 Tax=Bacillus sp. AP8 RepID=UPI0002F684DC
13_1_20cm_4_scaffold_2994_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(7199..8833)
DNA (1635bp) protein (545aa)
glpD; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3); K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CJP9_MYXFH
glycerol-3-phosphate dehydrogenase
13_1_20cm_4_scaffold_2994_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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8984..10243
DNA (1260bp) protein (420aa)
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16); K00632 acetyl-CoA acyltransferase [EC:2.3.1.16] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
fadI; acetyl-CoA acyltransferase (EC:2.3.1.16)
Acetyl-CoA acyltransferase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABM2_GEMAT
13_1_20cm_4_scaffold_2994_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10243..13179
DNA (2937bp) protein (979aa)
fadJ; multifunctional fatty acid oxidation complex subunit alpha; K01782 3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:1.1.1.35 4.2.1.17 5.1.2.3] Tax=RIFCS
3-hydroxyacyl-CoA dehydrogenase NAD-binding n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB30_ANASK
fadJ; multifunctional fatty acid oxidation complex subunit alpha
13_1_20cm_4_scaffold_2994_11
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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13209..13508
DNA (300bp) protein (100aa)
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_2994_12
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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13499..14431
DNA (933bp) protein (311aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C9K5_SPHTD
ribosome biogenesis GTPase RsgA
13_1_20cm_4_scaffold_2994_13
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(14388..14708)
DNA (321bp) protein (107aa)
Predicted pyrophosphatase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CZ60_PELTS
Predicted pyrophosphatase {ECO:0000313|EMBL:BAF60735.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum thermopropionicum
MazG; pyrophosphatase
13_1_20cm_4_scaffold_2994_14
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

14727..15980
DNA (1254bp) protein (418aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F366_CONWI
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_2994_15
Desulfohalobium retbaense, Desulfohalobium, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15957..16487)
DNA (531bp) protein (177aa)
Intracellular protease, PfpI family n=1 Tax=Desulfohalobium retbaense (strain DSM 5692) RepID=C8X3K0_DESRD
Intracellular protease, PfpI family {ECO:0000313|EMBL:ACV68997.1}; TaxID=485915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfohalobiaceae; Desulfohalobium.;" sourc
Pfpi family intracellular protease
13_1_20cm_4_scaffold_2994_16
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

16514..16786
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_2994_17
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

16796..18451
DNA (1656bp) protein (552aa)
hypothetical protein; K07047 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Amidohydrolase 3
amidohydrolase 3; K07047 id=24396407 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
13_1_20cm_4_scaffold_2994_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(18448..18714)
DNA (267bp) protein (89aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEF4_THET1
flavin reductase domain-containing FMN-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
flavin reductase domain-containing FMN-binding protein
Displaying 18 items

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