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13_1_20cm_4_scaffold_3333

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3333_1
Afipia broomeae, Afipia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..227)
DNA (225bp) protein (75aa)
High-affinity branched-chain amino acid transport system permease protein LivH (TC 3.A.1.4.1) n=1 Tax=Bradyrhizobiaceae bacterium SG-6C RepID=F7QKP6_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:EKS41816.1}; TaxID=883078 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia broomeae ATCC 49717
leucine/isoleucine/valine ABC transporter; permease component (LivH-like)
13_1_20cm_4_scaffold_3333_2
Bradyrhizobiaceae bacterium SG-6C, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(236..1462)
DNA (1227bp) protein (409aa)
ABC transporter substrate-binding protein n=1 Tax=Afipia birgiae RepID=UPI0002F198C2 rbh
ABC transporter substrate-binding protein {ECO:0000313|EMBL:EGP08416.1}; TaxID=709797 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae.;" source="Bradyrhizobiacea
amino acid/amide ABC transporter substrate-binding protein, HAAT family
13_1_20cm_4_scaffold_3333_3
Spirochaeta sp. JC202, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

1518..2963
DNA (1446bp) protein (482aa)
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein n=1 Tax=Streptomyces ipomoeae 91-03 RepID=L1KIS4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KGM38469.1}; TaxID=1329640 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC202.;"
hypothetical protein
13_1_20cm_4_scaffold_3333_4
unknown

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comp(3002..3535)
DNA (534bp) protein (178aa)

This feature has no annotations

13_1_20cm_4_scaffold_3333_5
unknown

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comp(3532..3903)
DNA (372bp) protein (124aa)

This feature has no annotations

13_1_20cm_4_scaffold_3333_6
unknown

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comp(3961..4896)
DNA (936bp) protein (312aa)

This feature has no annotations

13_1_20cm_4_scaffold_3333_7
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(4893..5447)
DNA (555bp) protein (185aa)
Uncharacterized protein {ECO:0000313|EMBL:AKF09073.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
13_1_20cm_4_scaffold_3333_8
RBG_13_Aminicenantes_64_14_curated, Aminicenantes, Bacteria

Not on your lists

comp(5447..7012)
DNA (1566bp) protein (522aa)
hypothetical protein; K07114 uncharacterized protein Tax=RBG_13_Aminicenantes_64_14_curated
hypothetical protein; K07114 uncharacterized protein id=24402393 bin=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial species=Methanosaeta concilii genus=Methanosaeta taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=RBG_19FT_COMBO_Aminicenantes_rel_58_17_partial organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate
hypothetical protein
13_1_20cm_4_scaffold_3333_9
Desulfovibrio vulgaris, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7176..8276
DNA (1101bp) protein (367aa)
Protein-glutamate methylesterase {ECO:0000256|SAAS:SAAS00158471}; EC=3.1.1.61 {ECO:0000256|SAAS:SAAS00158471};; TaxID=573059 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales;
Signal transduction histidine kinase with CheB and CheR activity n=1 Tax=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) RepID=A1VGD7_DESVV
signal transduction histidine kinase with CheB and CheR activity
13_1_20cm_4_scaffold_3333_10
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

8329..9804
DNA (1476bp) protein (492aa)
Uncharacterized protein n=1 Tax=Afipia felis ATCC 53690 RepID=K8NXX6_AFIFE rbh
MmgE/PrpD family protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
2-methylcitrate dehydratase
13_1_20cm_4_scaffold_3333_11
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

Not on your lists

comp(9846..11123)
DNA (1278bp) protein (426aa)
iron-containing alcohol dehydrogenase; K11173 hydroxyacid-oxoacid transhydrogenase [EC:1.1.99.24] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
Iron-containing alcohol dehydrogenase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C8G0_SPHTD
iron-containing alcohol dehydrogenase
13_1_20cm_4_scaffold_3333_12
R_Betaproteobacteria_62_17, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11217..11726
DNA (510bp) protein (170aa)
OsmC family protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S9C4_9BURK
OsmC family protein Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_62_17_curated
hypothetical protein
13_1_20cm_4_scaffold_3333_13
Myxococcus sp. (contaminant ex DSM 436), Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11878..12996)
DNA (1119bp) protein (373aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1297742 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; My
Uncharacterized protein n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2UC06_9DELT
two-component histidine kinase
13_1_20cm_4_scaffold_3333_14
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12993..13667)
DNA (675bp) protein (225aa)
Two component heavy metal response transcriptional regulator, winged helix family n=1 Tax=Myxococcus sp. (contaminant ex DSM 436) RepID=U2U401_9DELT rbh
DNA-binding heavy metal response regulator {ECO:0000313|EMBL:KFE62780.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hyalang
two component transcriptional regulator, winged helix family
13_1_20cm_4_scaffold_3333_15
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13818..14135)
DNA (318bp) protein (106aa)
Tax=RBG_16_Anaeromyxobacter_69_14_curated
13_1_20cm_4_scaffold_3333_16
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14356..15129)
DNA (774bp) protein (258aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:AJF68852.1}; EC=4.2.1.17 {ECO:0000313|EMBL:AJF68852.1};; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" sour
enoyl-CoA hydratase (EC:4.2.1.17)
Enoyl-CoA hydratase n=1 Tax=Streptomyces venezuelae (strain ATCC 10712 / CBS 650.69 / DSM 40230 / JCM 4526 / NBRC 13096 / PD 04745) RepID=F2R372_STRVP rbh
13_1_20cm_4_scaffold_3333_17
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15126..16199)
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S727_9BURK
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24888.1}; TaxID=68895 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholder
MmgE/PrpD family protein
13_1_20cm_4_scaffold_3333_18
Cupriavidus basilensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16361..17398)
DNA (1038bp) protein (346aa)
Cupriavidus basilensis strain 4G11 chromosome secondary, complete sequence {ECO:0000313|EMBL:AJG24887.1}; EC=2.8.3.16 {ECO:0000313|EMBL:AJG24887.1};; TaxID=68895 species="Bacteria; Proteobacteria; Bet
L-carnitine dehydratase/bile acid-inducible protein F (EC:2.8.3.16)
Acyl-CoA transferase/carnitine dehydratase n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GRF3_CUPNN
Displaying 18 items

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