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13_1_20cm_4_scaffold_3435

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3435_1
Gluconacetobacter diazotrophicus, Gluconacetobacter, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(1..480)
DNA (480bp) protein (160aa)
Putative membrane protein n=1 Tax=Gluconacetobacter diazotrophicus (strain ATCC 49037 / DSM 5601 / PAl5) RepID=A9HG84_GLUDA
Putative membrane protein {ECO:0000313|EMBL:CAP55461.1}; Uncharacterized protein {ECO:0000313|EMBL:ACI51971.1}; TaxID=272568 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; A
hypothetical protein
13_1_20cm_4_scaffold_3435_2
unknown

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623..1207
DNA (585bp) protein (195aa)

This feature has no annotations

13_1_20cm_4_scaffold_3435_3
CSP1_5_NC10, NC10, Bacteria

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comp(1275..3872)
DNA (2598bp) protein (866aa)
hypothetical protein Tax=CSP1_5_NC10
hypothetical protein id=14429401 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10
hypothetical protein
13_1_20cm_4_scaffold_3435_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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3920..4576
DNA (657bp) protein (219aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HGF7_ANADF
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ABS27803.1}; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteracea
ECF subfamily RNA polymerase sigma-24 factor
13_1_20cm_4_scaffold_3435_5
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4573..4824
DNA (252bp) protein (84aa)
Putative transmembrane anti-sigma factor n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q7J0_CATAD
putative transmembrane anti-sigma factor Tax=RBG_16_Anaeromyxobacter_69_14_curated
putative transmembrane anti-sigma factor
13_1_20cm_4_scaffold_3435_6
unknown

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4870..5277
DNA (408bp) protein (136aa)

This feature has no annotations

13_1_20cm_4_scaffold_3435_7
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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5303..6154
DNA (852bp) protein (284aa)
exodeoxyribonuclease III (EC:3.1.11.2); K01142 exodeoxyribonuclease III [EC:3.1.11.2] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
exodeoxyribonuclease III Xth (EC:3.1.11.2)
Exodeoxyribonuclease III Xth n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UB53_ANASK
13_1_20cm_4_scaffold_3435_8
R_Elusimicrobia_57_9, Elusimicrobia, Bacteria

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6313..8346
DNA (2034bp) protein (678aa)
Amino acid transporter-like protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HF01_ANADF
amino acid transporter-like protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_57_9_curated
amino acid transporter-like protein
13_1_20cm_4_scaffold_3435_9
Candidatus Entotheonella sp. TSY1, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(8350..9624)
DNA (1275bp) protein (425aa)
amidase n=1 Tax=Marinobacterium stanieri RepID=UPI000255A3DC rbh
Uncharacterized protein {ECO:0000313|EMBL:ETX02091.1}; TaxID=1429438 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY1.;"
amidase
13_1_20cm_4_scaffold_3435_10
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9621..10733)
DNA (1113bp) protein (371aa)
Putative succinyl-diaminopimelate desuccinylase n=1 Tax=Marinobacter sp. BSs20148 RepID=M1F6B3_9ALTE
dapE; succinyl-diaminopimelate desuccinylase Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
dapE; succinyl-diaminopimelate desuccinylase
13_1_20cm_4_scaffold_3435_11
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10730..11167)
DNA (438bp) protein (146aa)
livF3; ABC transporter ATPase (EC:3.6.3.22)
High-affinity branched-chain amino acid transport protein (ABC superfamily, ATP bind) n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1W4Z3_9BURK
livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
13_1_20cm_4_scaffold_3435_12
R_Rhodospirillales_65_14, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11170..11331)
DNA (162bp) protein (54aa)
livF; high-affinity branched-chain amino acid transport ATP-binding protein LivF Tax=RIFCSPLOWO2_01_FULL_Rhodospirillales_65_14_curated
13_1_20cm_4_scaffold_3435_13
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11331..12104)
DNA (774bp) protein (258aa)
livG3; ABC transporter ATPase (EC:3.6.3.22)
branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00037C84F4 rbh
braF; high-affinity branched-chain amino acid transport ATP-binding protein BraF Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
13_1_20cm_4_scaffold_3435_14
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12107..13075)
DNA (969bp) protein (323aa)
High-affinity branched-chain amino acid transport system permease protein BraE n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FF65_9ALTE
braE; high-affinity branched-chain amino acid transport system permease BraE Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
braE; high-affinity branched-chain amino acid transport system permease BraE
13_1_20cm_4_scaffold_3435_15
Marinobacter sp. BSs20148, Marinobacter, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13072..13992)
DNA (921bp) protein (307aa)
High-affinity branched-chain amino acid transport system permease protein BraD n=1 Tax=Marinobacter sp. BSs20148 RepID=M1FAZ2_9ALTE
High-affinity branched-chain amino acid transport system permease protein BraD {ECO:0000313|EMBL:AFP29017.1}; TaxID=490759 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alte
braD; high-affinity branched-chain amino acid transport system permease BraD
13_1_20cm_4_scaffold_3435_16
RLO_Rhodospirillales_67_15, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14001..15155)
DNA (1155bp) protein (385aa)
High-affinity branched-chain amino acid ABC transport system permease protein HAAT family n=1 Tax=Cupriavidus necator (strain ATCC 43291 / DSM 13513 / N-1) RepID=F8GRP8_CUPNN
vagC; virulence-like protein VagC; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rhodospirillales_67_15_curated
vagC; virulence-like protein VagC
13_1_20cm_4_scaffold_3435_17
CSP1_5_NC10, NC10, Bacteria

Not on your lists

15204..15974
DNA (771bp) protein (257aa)
alpha/beta hydrolase fold protein Tax=CSP1_5_NC10
alpha/beta hydrolase fold protein id=14430298 bin=bin3_NC10 species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin3_NC10 organism_group=NC10
alpha/beta hydrolase fold protein
13_1_20cm_4_scaffold_3435_18
unknown

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comp(16003..16119)
DNA (117bp) protein (39aa)

This feature has no annotations

Displaying 18 items

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