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13_1_20cm_4_scaffold_3608

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3608_1
unknown

Not on your lists

2..241
DNA (240bp) protein (80aa)

This feature has no annotations

13_1_20cm_4_scaffold_3608_2
R_Deltaproteobacteria_43_33, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(314..1168)
DNA (855bp) protein (285aa)
OmpA/MotB domain-containing protein; K02557 chemotaxis protein MotB Tax=RIFCSPHIGHO2_02_FULL_Deltaproteobacteria_43_33_curated
OmpA/MotB domain protein id=3338598 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
hypothetical protein
13_1_20cm_4_scaffold_3608_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1307..1798
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCI6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_4_scaffold_3608_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1782..2228
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCI7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_4_scaffold_3608_5
R_OP3X_45_10, OP3X, Bacteria

Not on your lists

2307..2762
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8L5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OP3X_45_10_curated
hypothetical protein
13_1_20cm_4_scaffold_3608_6
R_Planctomycetes_50_16, Planctomycetes, Bacteria

Not on your lists

2830..4134
DNA (1305bp) protein (435aa)
class III aminotransferase; K00823 4-aminobutyrate aminotransferase [EC:2.6.1.19] Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
4-aminobutyrate aminotransferase (EC:2.6.1.19)
4-aminobutyrate aminotransferase n=1 Tax=uncultured prokaryote RepID=H5SM04_9ZZZZ rbh
13_1_20cm_4_scaffold_3608_7
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(4487..4840)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Herbaspirillum lusitanum RepID=UPI00037BB913
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_3608_8
Geobacillus caldoxylosilyticus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4843..5463
DNA (621bp) protein (207aa)
aldehyde dehydrogenase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AE85
Succinate-semialdehyde dehydrogenase {ECO:0000313|EMBL:GAJ41360.1}; TaxID=1220594 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Geobacillus.;" source="Geobacillus caldoxylosilyticus
aldehyde dehydrogenase
13_1_20cm_4_scaffold_3608_9
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

5484..6083
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P898_9BACT
hypothetical protein Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
hypothetical protein
13_1_20cm_4_scaffold_3608_10
unknown

Not on your lists

6173..6367
DNA (195bp) protein (65aa)

This feature has no annotations

13_1_20cm_4_scaffold_3608_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6414..6830)
DNA (417bp) protein (139aa)
putative glutathione transferase FosA (EC:2.5.1.18) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative glutathione transferase FosA (EC:2.5.1.18)
Putative Glutathione transferase FosA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P8L0_9BACT
13_1_20cm_4_scaffold_3608_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6941..7951
DNA (1011bp) protein (337aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4V4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_4_scaffold_3608_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(7957..8808)
DNA (852bp) protein (284aa)
Phosphoesterase n=1 Tax=Candidatus Nitrospira defluvii RepID=B3U4V9_9BACT
trpH; hypothetical protein; K07053 Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
trpH; hypothetical protein
13_1_20cm_4_scaffold_3608_14
unknown

Not on your lists

8828..9169
DNA (342bp) protein (114aa)

This feature has no annotations

13_1_20cm_4_scaffold_3608_trna_2
unknown

Not on your lists

comp(9270..9359)
DNA (90bp)
transferRNA
13_1_20cm_4_scaffold_3608_15
unknown

Not on your lists

9666..10289
DNA (624bp) protein (208aa)

This feature has no annotations

13_1_20cm_4_scaffold_3608_trna_1
unknown

Not on your lists

comp(10604..10698)
DNA (95bp)
transferRNA
Displaying 17 items

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