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13_1_20cm_4_scaffold_3903

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3903_1
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(1..258)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6U5_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_3903_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

438..866
DNA (429bp) protein (143aa)
ATP-independent chaperone, alpha-crystallin/Hsp20 family n=2 Tax=Geobacter sulfurreducens RepID=D7AF92_GEOSK
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hspA-1; ATP-independent chaperone
13_1_20cm_4_scaffold_3903_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(947..1249)
DNA (303bp) protein (101aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_3903_4
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(1242..2576)
DNA (1335bp) protein (445aa)
glyQS; glycyl-tRNA synthetase (EC:6.1.1.14); K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glycine--tRNA ligase n=1 Tax=Caldithrix abyssi DSM 13497 RepID=H1XRC9_9BACT
Glycine-tRNA ligase, bacterial
13_1_20cm_4_scaffold_3903_5
GWA2_Elusimicrobia_69_24_curated, Elusimicrobia, Bacteria

Not on your lists

comp(2601..3683)
DNA (1083bp) protein (361aa)
glycerate kinase (EC:2.7.1.31); K00865 glycerate kinase [EC:2.7.1.31] Tax=GWA2_Elusimicrobia_69_24_curated
glycerate kinase (EC:2.7.1.31)
Glycerate kinase family protein id=2311409 bin=GWA2_Elusimicrobia_69_24 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
13_1_20cm_4_scaffold_3903_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(3863..4861)
DNA (999bp) protein (333aa)
Uncharacterized protein n=1 Tax=Exiguobacterium sp. MH3 RepID=U6BAJ1_9BACL rbh
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA {ECO:0000313|EMBL:AHG90345.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
Bacillithiol biosynthesis thiol disulfide oxidoreductase, YpdA
13_1_20cm_4_scaffold_3903_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4875..5711)
DNA (837bp) protein (279aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Adenylosuccinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T9_GEMAT
Adenylosuccinate synthetase
13_1_20cm_4_scaffold_3903_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(5740..6048)
DNA (309bp) protein (103aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T9_GEMAT
13_1_20cm_4_scaffold_3903_9
unknown

Not on your lists

comp(6210..7115)
DNA (906bp) protein (302aa)

This feature has no annotations

13_1_20cm_4_scaffold_3903_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7115..8002)
DNA (888bp) protein (296aa)
Putative dihydrodipicolinate synthetase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T6_GEMAT
putative dihydrodipicolinate synthetase Tax=RBG_16_Gemmatimonadetes_66_8_curated
dihydrodipicolinate synthetase
13_1_20cm_4_scaffold_3903_11
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7999..8889)
DNA (891bp) protein (297aa)
Twitching mobility protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T5_GEMAT
pilT; twitching mobility protein Tax=GWC2_Gemmatimonadetes_71_10_curated
twitching motility protein
13_1_20cm_4_scaffold_3903_12
RBG_13_OD1_Falkowbacteria_36_9_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(9047..9268)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003825D4C
Excinuclease ABC C subunit domain-containing protein; K07461 putative endonuclease Tax=RBG_13_OD1_Falkowbacteria_36_9_curated
excinuclease ABC subunit C
13_1_20cm_4_scaffold_3903_13
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

comp(9308..10168)
DNA (861bp) protein (287aa)
Putative oxidoreductase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T4_GEMAT
Putative oxidoreductase {ECO:0000313|EMBL:BAH37944.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmatimonas aurantiaca (strain T-
putative oxidoreductase
13_1_20cm_4_scaffold_3903_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(10330..11865)
DNA (1536bp) protein (512aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Tryptophan--tRNA ligase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T3_GEMAT
Tryptophan-tRNA ligase, bacterial-type
13_1_20cm_4_scaffold_3903_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

11905..12693
DNA (789bp) protein (263aa)
inositol monophosphatase; K01092 myo-inositol-1(or 4)-monophosphatase [EC:3.1.3.25] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Myo-inositol-1(Or 4)-monophosphatase n=4 Tax=Coxiella burnetii RepID=A9KE73_COXBN
inositol monophosphatase
13_1_20cm_4_scaffold_3903_16
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12694..14151
DNA (1458bp) protein (486aa)
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4)
Formiminotransferase-cyclodeaminase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6T1_GEMAT
13_1_20cm_4_scaffold_3903_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(14185..14946)
DNA (762bp) protein (254aa)
map; methionine aminopeptidase (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Methionine aminopeptidase n=1 Tax=Desmospora sp. 8437 RepID=F5SID7_9BACL
methionine aminopeptidase, type I
13_1_20cm_4_scaffold_3903_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(14943..15506)
DNA (564bp) protein (188aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Adenylate kinase (EC:2.7.4.3)
Adenylate kinase n=1 Tax=Leptospira wolffii serovar Khorat str. Khorat-H2 RepID=S3UVW5_9LEPT
13_1_20cm_4_scaffold_3903_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(15514..16827)
DNA (1314bp) protein (438aa)
Protein translocase subunit SecY n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6S5_GEMAT
secY; preprotein translocase secY subunit; K03076 preprotein translocase subunit SecY Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protein translocase subunit SecY
13_1_20cm_4_scaffold_3903_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists


comp(16836..17099)
DNA (264bp) protein (88aa)
50S ribosomal protein L15 n=1 Tax=Lachnospiraceae bacterium oral taxon 082 str. F0431 RepID=H1LUT9_9FIRM
rplO; 50S ribosomal protein L15; K02876 large subunit ribosomal protein L15 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
rplO; 50S ribosomal protein L15
Displaying 20 items

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