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13_1_20cm_4_scaffold_3994

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Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_3994_1
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

comp(1..225)
DNA (225bp) protein (75aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003629E4A
Tetratricopeptide repeat protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Tetratricopeptide repeat protein
13_1_20cm_4_scaffold_3994_2
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


comp(300..1835)
DNA (1536bp) protein (512aa)
pheS; phenylalanyl-tRNA ligase subunit alpha (EC:6.1.1.20) Tax=RBG_16_Euryarchaeota_67_27_curated
pheS; phenylalanyl-tRNA ligase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9TBX4_9EURY rbh
13_1_20cm_4_scaffold_3994_3
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

2022..2684
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MG79_9EURY
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_20cm_4_scaffold_3994_4
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

2681..3868
DNA (1188bp) protein (396aa)
Small GTP-binding protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ28_ARCVS
small GTP-binding protein Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
small GTP-binding protein
13_1_20cm_4_scaffold_3994_5
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

3868..4257
DNA (390bp) protein (130aa)
Roadblock/LC7 family protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7X7_METSW
Roadblock/LC7 family protein; K07131 Tax=RBG_16_Euryarchaeota_68_13_curated
Roadblock/LC7 family protein
13_1_20cm_4_scaffold_3994_6
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

4254..4637
DNA (384bp) protein (128aa)
Roadblock/LC7 family protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KQ29_ARCVS
Roadblock/LC7 family protein; K07131 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
Roadblock/LC7 family protein
13_1_20cm_4_scaffold_3994_7
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

4691..5416
DNA (726bp) protein (242aa)
Circadian clock protein, KaiC n=1 Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
RecA-superfamily ATPase possibly involved in signal transduction
13_1_20cm_4_scaffold_3994_8
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

5852..7030
DNA (1179bp) protein (393aa)
Circadian clock protein, KaiC n=1 Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
circadian clock protein, KaiC
13_1_20cm_4_scaffold_3994_9
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

7041..7784
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000380433D
KaiC domain protein, AF_0351 family Tax=RBG_16_Euryarchaeota_68_13_curated
KaiC 1
13_1_20cm_4_scaffold_3994_10
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

7789..8319
DNA (531bp) protein (177aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_3994_11
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

8316..10061
DNA (1746bp) protein (582aa)
Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
13_1_20cm_4_scaffold_3994_12
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists

10058..10774
DNA (717bp) protein (239aa)
Circadian clock protein, KaiC n=1 Tax=mine drainage metagenome RepID=T1C6X0_9ZZZZ
RecA-superfamily ATPase possibly involved in signal transduction Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
hypothetical protein
13_1_20cm_4_scaffold_3994_13
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(10775..11896)
DNA (1122bp) protein (374aa)
trpS; tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI00036EDE49
Tryptophanyl-tRNA synthetase
13_1_20cm_4_scaffold_3994_14
unknown

Not on your lists

comp(11941..12384)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_20cm_4_scaffold_3994_15
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists

comp(12397..12975)
DNA (579bp) protein (193aa)
3-hexulose-6-phosphate isomerase (6-phospho-3-hexuloisomerase) (PHI) n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8B8_9EURY
3-hexulose-6-phosphate isomerase (6-phospho-3-hexuloisomerase) (PHI) Tax=RBG_16_Euryarchaeota_67_27_curated
3-hexulose-6-phosphate isomerase (6-phospho-3-hexuloisomerase) (PHI)
13_1_20cm_4_scaffold_3994_16
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

comp(12972..13520)
DNA (549bp) protein (183aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI0003630E07
Xylose isomerase domain protein TIM barrel Tax=RBG_16_Euryarchaeota_68_13_curated
xylose isomerase-like TIM barrel
13_1_20cm_4_scaffold_3994_17
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


14093..14455
DNA (363bp) protein (121aa)
50S ribosomal protein L18e n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T7N2_9EURY
50S ribosomal protein L18e Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
50S ribosomal protein L18e
13_1_20cm_4_scaffold_3994_18
RBG_16_Euryarchaeota_67_27_curated, Euryarchaeota, Archaea

Not on your lists


14458..14898
DNA (441bp) protein (147aa)
50S ribosomal protein L13 n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KPR3_ARCVS
rpl13p; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RBG_16_Euryarchaeota_67_27_curated
50S ribosomal protein L13
13_1_20cm_4_scaffold_3994_19
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


14895..15293
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Candidatus Methanomassiliicoccus intestinalis Issoire-Mx1 RepID=R9T8H6_9EURY
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
rps9p; 30S ribosomal protein S9P
13_1_20cm_4_scaffold_3994_20
RBG_19FT_COMBO_Euryarchaeota_69_17_curated, Euryarchaeota, Archaea

Not on your lists


15298..15489
DNA (192bp) protein (64aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6) Tax=RBG_19FT_COMBO_Euryarchaeota_69_17_curated
DNA-directed RNA polymerase subunit N (EC:2.7.7.6)
DNA-directed RNA polymerase subunit N n=2 Tax=Euryarchaeota RepID=M9SES4_9EURY
13_1_20cm_4_scaffold_3994_21
unknown

Not on your lists

15802..18654
DNA (2853bp) protein (951aa)

This feature has no annotations

13_1_20cm_4_scaffold_3994_22
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(18737..19195)
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon E-plasma RepID=T0MUY2_9EURY
peptidyl-prolyl cis-trans isomerase Tax=RBG_16_Euryarchaeota_68_12_curated
peptidyl-prolyl cis-trans isomerase
13_1_20cm_4_scaffold_3994_23
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(19252..21342)
DNA (2091bp) protein (697aa)
Quinoprotein glucose dehydrogenase (EC:1.1.5.2)
Quinoprotein glucose dehydrogenase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C898_SPHTD
wcoG; putative cell surface protein Tax=RBG_16_Euryarchaeota_68_12_curated
13_1_20cm_4_scaffold_3994_24
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21373..22188)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F4A0_MODMB
Uncharacterized protein {ECO:0000313|EMBL:CCH90463.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain
hypothetical protein
13_1_20cm_4_scaffold_3994_25
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

comp(22185..22733)
DNA (549bp) protein (183aa)
rhlE; ATP-dependent RNA helicase RhlE (EC:3.6.1.-)
ATP-dependent RNA helicase RhlE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AE59_GEMAT
DNA/RNA helicase Tax=RBG_16_Euryarchaeota_68_12_curated
Displaying 25 items

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