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13_1_20cm_4_scaffold_4110

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Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4110_1
Rhodothermus marinus, Rhodothermus, Bacteroidetes Order II. Incertae sedis, Bacteroidetes, Bacteria

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2..577
DNA (576bp) protein (192aa)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=762570 species="Bacteria; Bacteroidetes; Bacteroidetes Order II. Incert
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Rhodothermus marinus SG0.5JP17-172 RepID=G2SHK3_RHOMR
ribosome biogenesis GTPase RsgA
13_1_20cm_4_scaffold_4110_2
Desulfotomaculum gibsoniae, Desulfotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(534..854)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Desulfotomaculum gibsoniae DSM 7213 RepID=R4KMX6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:AGL01915.1}; TaxID=767817 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfotomaculum.;" source="Desulfotomaculum gibsoniae DSM
hypothetical protein
13_1_20cm_4_scaffold_4110_3
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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873..2138
DNA (1266bp) protein (422aa)
Uncharacterised conserved protein UCP033563 n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HA75_ANADF
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_4110_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2177..2452
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABH3_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_4110_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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2462..4114
DNA (1653bp) protein (551aa)
hypothetical protein; K07047 Tax=RBG_16_Gemmatimonadetes_66_8_curated
Amidohydrolase 3
Putative metal-dependent hydrolase; K07047 id=17257035 bin=RBG_16_Aminicenantes_63_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Aminicenantes tax=RBG_16_Aminicenantes_63_14 organism_group=OP8 (Aminicenantes) organism_desc=Curation Candidate rbh
13_1_20cm_4_scaffold_4110_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4111..4593)
DNA (483bp) protein (161aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CEF4_THET1
flavin reductase domain-containing FMN-binding protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
flavin reductase domain-containing FMN-binding protein
13_1_20cm_4_scaffold_4110_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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4624..6222
DNA (1599bp) protein (533aa)
2-oxo acid dehydrogenase E1 component alpha/beta subunit; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=RBG_16_Gemmatimonadetes_66_8_curated
2-oxo acid dehydrogenase E1 component alpha/beta subunit n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1ABG2_GEMAT
2-oxo acid dehydrogenase E1 component alpha/beta subunit
13_1_20cm_4_scaffold_4110_8
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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6219..6635
DNA (417bp) protein (139aa)
2-oxo acid dehydrogenase E1 component alpha/beta subunit; K11381 2-oxoisovalerate dehydrogenase E1 component [EC:1.2.4.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring), Pyruvate dehydrogenase (Acetyl-transferring) n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NZ13_GRAMM
dehydrogenase E1 component
13_1_20cm_4_scaffold_4110_9
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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6625..9714
DNA (3090bp) protein (1030aa)
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] Tax=GWC2_Gemmatimonadetes_71_10_curated
spermine synthase; K00797 spermidine synthase [EC:2.5.1.16] id=14429470 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Omnitrophica tax=bin3_NC10 organism_group=NC10
speE2; spermine/spermidine synthase family protein
13_1_20cm_4_scaffold_4110_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(9711..10253)
DNA (543bp) protein (181aa)
putative serine/threonine protein kinase (EC:2.7.11.1); K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
Putative serine/threonine protein kinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL9_GEMAT
protein kinase
13_1_20cm_4_scaffold_4110_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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11697..12641
DNA (945bp) protein (315aa)
lon; ATP-dependent Lon protease (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
lon; ATP-dependent Lon protease (EC:3.4.21.53)
Lon protease n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAM1_GEMAT
13_1_20cm_4_scaffold_4110_12
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

12622..14010
DNA (1389bp) protein (463aa)
lon; ATP-dependent Lon protease (EC:3.4.21.53); K01338 ATP-dependent Lon protease [EC:3.4.21.53] Tax=RBG_16_Gemmatimonadetes_66_8_curated
anti-sigma H sporulation factor LonB (EC:3.4.21.53)
Lon protease n=1 Tax=Thermus thermophilus (strain SG0.5JP17-16) RepID=F6DH21_THETG
13_1_20cm_4_scaffold_4110_13
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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14250..16079
DNA (1830bp) protein (610aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A719_GEMAT
Uncharacterized protein {ECO:0000313|EMBL:AHG88939.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
hypothetical protein
13_1_20cm_4_scaffold_4110_14
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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16034..16555
DNA (522bp) protein (174aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
hypothetical protein id=12555813 bin=CNBR_ACIDO species=Gemmatimonas aurantiaca genus=Gemmatimonas taxon_order=Gemmatimonadales taxon_class=Gemmatimonadetes phylum=Gemmatimonadetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
13_1_20cm_4_scaffold_4110_15
unknown

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comp(16569..16988)
DNA (420bp) protein (140aa)

This feature has no annotations

13_1_20cm_4_scaffold_4110_16
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

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comp(17204..18088)
DNA (885bp) protein (295aa)
Alpha/beta hydrolase fold n=1 Tax=Glaciecola lipolytica E3 RepID=K6YDF9_9ALTE
alpha/beta hydrolase fold protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_20cm_4_scaffold_4110_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(18081..18671)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:194 RepID=R5QGK1_9FIRM
transcriptional regulator TrmB Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
hypothetical protein
13_1_20cm_4_scaffold_4110_18
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(18722..19822)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AAL5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_4110_19
Pyrinomonas methylaliphatogenes, Pyrinomonas, Acidobacteria, Bacteria

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comp(20196..21521)
DNA (1326bp) protein (442aa)
Peptidase M28 n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QCN4_9CYAN
Predicted aminopeptidase {ECO:0000313|EMBL:CDM65305.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomonas.;" source="Pyrinomonas methylaliphatogenes.;"
peptidase M28
13_1_20cm_4_scaffold_4110_20
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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21532..22182
DNA (651bp) protein (217aa)
leuC2; 3-isopropylmalate dehydratase (EC:4.2.1.33); K01703 3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35] Tax=RBG_16_Gemmatimonadetes_66_8_curated
3-isopropylmalate dehydratase n=1 Tax=Cupriavidus basilensis OR16 RepID=H1S5L2_9BURK
3-isopropylmalate dehydratase
Displaying 20 items

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