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13_1_20cm_4_scaffold_4142

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4142_1
unknown

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comp(3..152)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_4_scaffold_4142_2
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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229..2385
DNA (2157bp) protein (719aa)
PT repeat/DnaJ domain-containing protein n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7U7P5_MYXSD rbh
PT repeat/DnaJ domain-containing protein {ECO:0000313|EMBL:AGC42499.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.
PT repeat/DnaJ domain-containing protein rbh
13_1_20cm_4_scaffold_4142_3
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2382..2678)
DNA (297bp) protein (99aa)
RNA-binding protein n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4XIZ8_SORCE
RNA-binding protein {ECO:0000313|EMBL:AGP32489.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium cellu
RNA-binding protein
13_1_20cm_4_scaffold_4142_4
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(2666..3493)
DNA (828bp) protein (276aa)
Ribonuclease HII {ECO:0000255|HAMAP-Rule:MF_00052}; Short=RNase HII {ECO:0000255|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000255|HAMAP-Rule:MF_00052};; TaxID=404589 species="Bacteria; Proteobacteria;
Ribonuclease HII n=2 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=RNH2_ANADF
rnhB; ribonuclease HII
13_1_20cm_4_scaffold_4142_5
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3576..4016)
DNA (441bp) protein (147aa)
Putative cyclase/dehydrase n=1 Tax=Myxococcus fulvus (strain ATCC BAA-855 / HW-1) RepID=F8CQP8_MYXFH
Putative cyclase/dehydrase {ECO:0000313|EMBL:AEI67962.1}; TaxID=483219 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxo
putative cyclase/dehydrase
13_1_20cm_4_scaffold_4142_6
Anaeromyxobacter sp. K, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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4092..5435
DNA (1344bp) protein (448aa)
Fmu (Sun) domain protein n=1 Tax=Anaeromyxobacter sp. (strain K) RepID=B4UMC1_ANASK rbh
Fmu (Sun) domain protein {ECO:0000313|EMBL:ACG71529.1}; TaxID=447217 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
Fmu (Sun) domain-containing protein
13_1_20cm_4_scaffold_4142_7
Chloracidobacterium thermophilum, Chloracidobacterium, Acidobacteria, Bacteria

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5438..5980
DNA (543bp) protein (181aa)
Dehydrogenase with different specificities, short-chain alcohol dehydrogenases like protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJR2_CHLTF
Dehydrogenase with different specificities, short-chain alcohol dehydrogenases like protein {ECO:0000313|EMBL:AEP13079.1}; TaxID=981222 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; C
short-chain alcohol dehydrogenase
13_1_20cm_4_scaffold_4142_8
Anaeromyxobacter dehalogenans, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5961..7028)
DNA (1068bp) protein (356aa)
4Fe-4S ferredoxin, iron-sulfur binding protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2ILU6_ANADE rbh
4Fe-4S ferredoxin, iron-sulfur binding protein {ECO:0000313|EMBL:ABC82623.1}; TaxID=290397 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae
4Fe-4S ferredoxin
13_1_20cm_4_scaffold_4142_9
unknown

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7060..7533
DNA (474bp) protein (158aa)

This feature has no annotations

13_1_20cm_4_scaffold_4142_10
Methylococcus capsulatus, Methylococcus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

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7574..8581
DNA (1008bp) protein (336aa)
Putative isocitrate dehydrogenase, NAD-dependent n=1 Tax=Methylococcus capsulatus (strain ATCC 33009 / NCIMB 11132 / Bath) RepID=Q602J2_METCA
Putative isocitrate dehydrogenase, NAD-dependent {ECO:0000313|EMBL:AAU90861.1}; TaxID=243233 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylococcus.;"
NAD-dependent isocitrate dehydrogenase
13_1_20cm_4_scaffold_4142_11
RIFOXYC2_FULL_Ignavibacteria_38_25_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8903..9463)
DNA (561bp) protein (187aa)
ATP:cob(I)alamin adenosyltransferase Tax=RIFOXYC2_FULL_Ignavibacteria_38_25_curated
ATP:cob(I)alamin adenosyltransferase, putative id=3905768 bin=GWF2_Melioribacter_38_21 species=Melioribacter roseus genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
putative ATP:cob(I)alamin adenosyltransferase
13_1_20cm_4_scaffold_4142_12
unknown

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9523..9927
DNA (405bp) protein (135aa)

This feature has no annotations

13_1_20cm_4_scaffold_4142_13
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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10258..10782
DNA (525bp) protein (175aa)
RluA family pseudouridine synthase (EC:3.2.1.17); K06179 23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Pseudouridine synthase n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6D3_ANADF
RluA family pseudouridine synthase
13_1_20cm_4_scaffold_4142_14
Anaeromyxobacter sp. Fw109-5, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10909..13335
DNA (2427bp) protein (809aa)
Penicillin-binding protein, 1A family {ECO:0000313|EMBL:ABS24280.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABS24280.1};; TaxID=404589 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cys
Penicillin-binding protein, 1A family n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7H6D4_ANADF rbh
1A family penicillin-binding protein
13_1_20cm_4_scaffold_4142_15
Marinomonas posidonica, Marinomonas, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13230..13637)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181) RepID=F6CWM3_MARPP
Uncharacterized protein {ECO:0000313|EMBL:AEF54373.1}; TaxID=491952 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Marinomonas.;" source="Marinomonas posidonica (strain CEC
hypothetical protein
13_1_20cm_4_scaffold_4142_16
unknown

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13717..13776
DNA (60bp) protein (20aa)

This feature has no annotations

Displaying 16 items

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