ggKbase home page

13_1_20cm_4_scaffold_4325

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4325_1
Candidatus Methylomirabilis oxyfera, Candidatus Methylomirabilis, Bacteria

Not on your lists

comp(2..1177)
DNA (1176bp) protein (392aa)
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MN39_9BACT
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase {ECO:0000313|EMBL:CBE68141.1}; TaxID=671143 species="Bacteria; candidate division NC10; Candidatus Methylomirabilis.;" source="Candidat
Uroporphyrinogen-III methylase and Uroporphyrinogen-III synthase
13_1_20cm_4_scaffold_4325_2
Planomicrobium glaciei, Planomicrobium, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1221..2057)
DNA (837bp) protein (279aa)
heptaprenyl diphosphate synthase component II (EC:2.5.1.30)
Trans-hexaprenyltranstransferase n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HP56_9FIRM
Heptaprenyl diphosphate synthase subunit II {ECO:0000313|EMBL:ETP70690.1}; TaxID=1273538 species="Bacteria; Firmicutes; Bacilli; Bacillales; Planococcaceae; Planomicrobium.;" source="Planomicrobium gl
13_1_20cm_4_scaffold_4325_3
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2162..3064)
DNA (903bp) protein (301aa)
chemotaxis protein CheY n=1 Tax=Azoarcus toluclasticus RepID=UPI00035E0316
Phosphate regulon transcriptional regulatory protein PhoB (SphR) {ECO:0000313|EMBL:CCU61178.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae
two component transcriptional regulator
13_1_20cm_4_scaffold_4325_trna_3
unknown

Not on your lists

comp(3112..3184)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_4325_4
Bacillus cibi, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3224..4081)
DNA (858bp) protein (286aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.35)
3-hydroxyacyl-CoA dehydrogenase n=1 Tax=Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 / T2) RepID=D5WTI2_KYRT2
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:KEZ53762.1}; TaxID=265729 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus cibi.;"
13_1_20cm_4_scaffold_4325_5
Corynebacterium glutamicum, Corynebacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4092..4394
DNA (303bp) protein (101aa)
Uncharacterized protein n=4 Tax=Corynebacterium glutamicum RepID=I0LND9_CORGK
Uncharacterized protein {ECO:0000313|EMBL:KEI24439.1}; TaxID=1079988 species="Bacteria; Actinobacteria; Corynebacteriales; Corynebacteriaceae; Corynebacterium.;" source="Corynebacterium glutamicum ATC
hypothetical protein
13_1_20cm_4_scaffold_4325_6
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(4391..4837)
DNA (447bp) protein (149aa)
Flavin reductase domain protein FMN-binding protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C834_SPHTD
Flavin reductase domain protein FMN-binding protein {ECO:0000313|EMBL:ACZ39977.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobactera
flavin reductase domain-containing protein FMN-binding protein
13_1_20cm_4_scaffold_4325_trna_1
unknown

Not on your lists

4931..5001
DNA (71bp)
transferRNA
13_1_20cm_4_scaffold_4325_7
Modestobacter multiseptatus, Modestobacter, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5212..5520)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F4H3_MODMB
Uncharacterized protein {ECO:0000313|EMBL:CCH90536.1}; TaxID=1144889 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Modestobacter.;" source="Modestobacter marinus (strain
hypothetical protein
13_1_20cm_4_scaffold_4325_8
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5671..6237
DNA (567bp) protein (189aa)
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; EC=2.3.1.61;; 2-oxoglutarate dehydrogenase complex component E2 {ECO:0000256|RuleBase:RU361138}; TaxI
2-oxoglutarate dehydrogenase E2 component n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IIR9_9SPHN
sucB; 2-oxoglutarate dehydrogenase E2 component
13_1_20cm_4_scaffold_4325_9
Thermobaculum terrenum, Thermobaculum, Bacteria

Not on your lists

6234..6824
DNA (591bp) protein (197aa)
Catalytic domain of components of various dehydrogenase complexes n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CDL1_THET1
Catalytic domain of components of various dehydrogenase complexes {ECO:0000313|EMBL:ACZ41017.1}; TaxID=525904 species="Bacteria; Thermobaculum.;" source="Thermobaculum terrenum (strain ATCC BAA-798 /
catalytic domain of components of various dehydrogenase complexes
13_1_20cm_4_scaffold_4325_10
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

6821..7717
DNA (897bp) protein (299aa)
Lipoyl synthase {ECO:0000255|HAMAP-Rule:MF_00206}; EC=2.8.1.8 {ECO:0000255|HAMAP-Rule:MF_00206};; Lip-syn {ECO:0000255|HAMAP-Rule:MF_00206}; Short=LS {ECO:0000255|HAMAP-Rule:MF_00206};; Lipoate syntha
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI00030A5A84
lipoyl synthase
13_1_20cm_4_scaffold_4325_11
RBG_16_Chloroflexi_54_11_curated, Chloroflexi, Bacteria

Not on your lists

7674..8384
DNA (711bp) protein (237aa)
lipoate-protein ligase B; K03801 lipoyl(octanoyl) transferase [EC:2.3.1.181] Tax=RBG_16_Chloroflexi_54_11_curated
hypothetical protein n=1 Tax=Sulfobacillus thermosulfidooxidans RepID=UPI0002FE864F
lipoate-protein ligase B
13_1_20cm_4_scaffold_4325_12
unknown

Not on your lists

8494..8829
DNA (336bp) protein (112aa)

This feature has no annotations

13_1_20cm_4_scaffold_4325_13
unknown

Not on your lists

8959..9255
DNA (297bp) protein (99aa)

This feature has no annotations

13_1_20cm_4_scaffold_4325_14
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9269..10864)
DNA (1596bp) protein (532aa)
Malate synthase {ECO:0000256|RuleBase:RU000555}; EC=2.3.3.9 {ECO:0000256|RuleBase:RU000555};; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae
malate synthase A (EC:2.3.3.9)
Malate synthase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SML9_THEM7 rbh
13_1_20cm_4_scaffold_4325_15
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(10888..11826)
DNA (939bp) protein (313aa)
UPI0003145295 related cluster n=1 Tax=unknown RepID=UPI0003145295
luciferase-like protein Tax=RBG_16_Chloroflexi_68_14_curated
luciferase-like protein
13_1_20cm_4_scaffold_4325_trna_2
unknown

Not on your lists

comp(11850..11923)
DNA (74bp)
transferRNA
Displaying 18 items

View Taxonomy