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13_1_20cm_4_scaffold_4508

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4508_1
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..969
DNA (969bp) protein (323aa)
ABC transporter substrate binding protein precursor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=CSP1_8_Deltaproteobacteria
ABC transporter substrate binding protein precursor; K01999 branched-chain amino acid transport system substrate-binding protein id=14624521 bin=bin5_DeltaP species=Desulfovibrio magneticus genus=Desulfovibrio taxon_order=Desulfovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria
ABC transporter substrate binding protein precursor
13_1_20cm_4_scaffold_4508_2
RBG_16_Deltaproteobacteria_71_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1398..1670)
DNA (273bp) protein (91aa)
Tax=RBG_16_Deltaproteobacteria_71_12_curated
13_1_20cm_4_scaffold_4508_3
Symbiobacterium thermophilum, Symbiobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1731..2534
DNA (804bp) protein (268aa)
Branched-chain amino acid ABC transporter ATP-binding protein n=1 Tax=Symbiobacterium thermophilum (strain T / IAM 14863) RepID=Q67RK0_SYMTH
Branched-chain amino acid ABC transporter ATP-binding protein {ECO:0000313|EMBL:BAD39693.1}; TaxID=292459 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Symbiobacteriaceae; Symbiobacterium.
branched-chain amino acid ABC transporter ATP-binding protein
13_1_20cm_4_scaffold_4508_4
CSP1_3_Armatimonadetes, Armatimonadetes, Bacteria

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2790..3698
DNA (909bp) protein (303aa)
coenzyme F390 synthetase Tax=CSP1_3_Armatimonadetes
coenzyme F390 synthetase id=14632690 bin=bin9_gal15 species=Desulfomonile tiedjei genus=Desulfomonile taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin9_gal15 organism_group=GAL15
AMP-dependent synthetase and ligase
13_1_20cm_4_scaffold_4508_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

3749..4114
DNA (366bp) protein (122aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI000360F29E
cupin domain protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Cupin 2 conserved barrel domain protein
13_1_20cm_4_scaffold_4508_6

Not on your lists

4122..4889
DNA (768bp) protein (256aa)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=mine drainage metagenome RepID=E6PD18_9ZZZZ
Oxidoreductase, short chain dehydrogenase/reductase family {ECO:0000313|EMBL:CBH74353.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage met
short-chain dehydrogenase/reductase SDR
13_1_20cm_4_scaffold_4508_7
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(5011..7326)
DNA (2316bp) protein (772aa)
Gll1201 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NLC5_GLOVI
Gll1201 protein {ECO:0000313|EMBL:BAC89142.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
hypothetical protein
13_1_20cm_4_scaffold_4508_8
Myxococcus stipitatus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7570..9102
DNA (1533bp) protein (511aa)
Periplasmic serine protease n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UFT4_MYXSD
Periplasmic serine protease {ECO:0000313|EMBL:AGC47826.1}; TaxID=1278073 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="My
periplasmic serine protease
13_1_20cm_4_scaffold_4508_9
Haliangium ochraceum, Haliangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9104..9817)
DNA (714bp) protein (238aa)
Metal dependent phosphohydrolase n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) RepID=D0LXV4_HALO1
Metal dependent phosphohydrolase {ECO:0000313|EMBL:ACY14309.1}; TaxID=502025 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Nannocystineae; Kofleriaceae; Haliangium.;" source="H
metal dependent phosphohydrolase
13_1_20cm_4_scaffold_4508_10
RLO_Betaproteobacteria_68_20, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9814..10743)
DNA (930bp) protein (310aa)
dihydrodipicolinate synthetase (EC:4.2.1.-); K01714 dihydrodipicolinate synthase [EC:4.2.1.52] Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_68_20_curated
Dihydrodipicolinate synthetase id=4141953 bin=GWA2_Methylomirabilis_73_35 species=Marinobacter sp. ELB17 genus=Marinobacter taxon_order=Alteromonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
dihydrodipicolinate synthetase family protein
13_1_20cm_4_scaffold_4508_11
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11098..12567)
DNA (1470bp) protein (490aa)
Putative regulatory protein Ada {ECO:0000313|EMBL:CAN96372.1}; EC=2.1.1.63 {ECO:0000313|EMBL:CAN96372.1};; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiine
ada; regulatory protein Ada (EC:2.1.1.63)
Putative regulatory protein Ada n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9GGV5_SORC5
13_1_20cm_4_scaffold_4508_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

12725..13996
DNA (1272bp) protein (424aa)
amidohydrolase Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Amidohydrolase id=4817215 bin=GWC2_Ignavibacteria_56_12 species=Janthinobacterium sp. HH01 genus=Janthinobacterium taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
amidohydrolase domain-containing protein
13_1_20cm_4_scaffold_4508_13
Hyalangium minutum, Hyalangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13977..14975)
DNA (999bp) protein (333aa)
Transcriptional regulator, DeoR family protein {ECO:0000313|EMBL:KFE66484.1}; TaxID=394096 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Hya
hypothetical protein
13_1_20cm_4_scaffold_4508_14
unknown

Not on your lists

15089..15292
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_20cm_4_scaffold_4508_15
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15373..15744
DNA (372bp) protein (124aa)
ArsR family transcriptional regulator n=1 Tax=Sorangium cellulosum So0157-2 RepID=S4Y260_SORCE
ArsR family transcriptional regulator {ECO:0000313|EMBL:AGP38566.1}; TaxID=1254432 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" sourc
ArsR family transcriptional regulator
13_1_20cm_4_scaffold_4508_16
Gloeobacter violaceus, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

15744..16247
DNA (504bp) protein (168aa)
ATPase n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B3DFA9
Gll1436 protein {ECO:0000313|EMBL:BAC89377.1}; TaxID=251221 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter violaceus (strain PCC 7421).;"
hypothetical protein
13_1_20cm_4_scaffold_4508_17
GWC2_Pelobacteraceae_58_13_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16221..16328)
DNA (108bp) protein (36aa)
DNA-3-methyladenine glycosylase (EC:3.2.2.20); K01246 DNA-3-methyladenine glycosylase I [EC:3.2.2.20] Tax=GWC2_Pelobacteraceae_58_13_curated
3-methyladenine DNA glycosylase
DNA-3-methyladenine glycosylase id=4638670 bin=GWC2_Pelobacter_58_13 species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Pelobacter_58_13 organism_group=Deltaproteobacteria organism_desc=Good +
Displaying 17 items

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