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13_1_20cm_4_scaffold_4550

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4550_1
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105..1274
DNA (1170bp) protein (390aa)
Cardiolipin synthase n=1 Tax=Corallococcus coralloides (strain ATCC 25202 / DSM 2259 / NBRC 100086 / M2) RepID=H8MV08_CORCM
Cardiolipin synthase {ECO:0000313|EMBL:AKF84329.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococcu
cls1; cardiolipin synthase
13_1_20cm_4_scaffold_4550_2
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1308..1715)
DNA (408bp) protein (136aa)
Uncharacterized protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JA36_ANAD2
Uncharacterized protein {ECO:0000313|EMBL:GAO02564.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae; Anaeromyxobacter.;"
hypothetical protein
13_1_20cm_4_scaffold_4550_3
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(1712..2368)
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00037572AD
Uncharacterized protein {ECO:0000313|EMBL:EEF62038.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera.;" source="Pedo
hypothetical protein
13_1_20cm_4_scaffold_4550_4
Anaeromyxobacter sp. PSR-1, Anaeromyxobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2408..3289)
DNA (882bp) protein (294aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-1 / ATCC BAA-258) RepID=B8JA37_ANAD2 rbh
Putative ECF RNA polymerase sigma factor SigI {ECO:0000313|EMBL:GAO02563.1}; TaxID=1300915 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Anaeromyxobacteraceae
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_4_scaffold_4550_5
RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3377..4465
DNA (1089bp) protein (363aa)
Putative mannose-6-phosphate isomerase protein n=1 Tax=Ralstonia solanacearum (strain Po82) RepID=F6G5P4_RALS8
cupin Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_65_14_curated
putative mannose-6-phosphate isomerase protein
13_1_20cm_4_scaffold_4550_6
CSP1_8_Deltaproteobacteria, 43F-1404R, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4398..7634)
DNA (3237bp) protein (1079aa)
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family Tax=CSP1_8_Deltaproteobacteria
acriflavin resistance protein; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=14623092 bin=bin5_DeltaP species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin5_DeltaP organism_group=Deltaproteobacteria rbh
acriflavin resistance protein
13_1_20cm_4_scaffold_4550_7
RBG_19FT_COMBO_Nitrospirae_55_12_curated, Nitrospirae, Bacteria

Not on your lists

comp(7631..8758)
DNA (1128bp) protein (376aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=uncultured prokaryote RepID=H5SEL2_9ZZZZ
RND family efflux transporter MFP subunit; K07799 putative multidrug efflux transporter MdtA Tax=RBG_19FT_COMBO_Nitrospirae_55_12_curated
secretion protein HlyD rbh
13_1_20cm_4_scaffold_4550_8
RBG_13_Acidobacteria_68_16_curated, Acidobacteria, Bacteria

Not on your lists

comp(8755..10176)
DNA (1422bp) protein (474aa)
Outer membrane efflux protein n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=Q2IJG0_ANADE rbh
outer membrane efflux protein Tax=RBG_13_Acidobacteria_68_16_curated
outer membrane efflux protein
13_1_20cm_4_scaffold_4550_9
Cystobacter fuscus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10244..10702
DNA (459bp) protein (153aa)
YbhB and YbcL n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QIU1_9DELT
YbhB and YbcL {ECO:0000313|EMBL:EPX56388.1}; TaxID=1242864 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacteraceae; Cystobacter.;" source="Cystobacter
phosphatidylethanolamine-binding protein
13_1_20cm_4_scaffold_4550_10
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

10944..13196
DNA (2253bp) protein (751aa)
Response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NP64_ROSCS
diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Tax=RBG_16_Gemmatimonadetes_66_8_curated
response regulator receiver modulated PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
13_1_20cm_4_scaffold_4550_11
Myxococcus fulvus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13356..14615
DNA (1260bp) protein (420aa)
Xaa-Pro aminopeptidase family enzyme n=1 Tax=Myxococcus stipitatus (strain DSM 14675 / JCM 12634 / Mx s8) RepID=L7UJX5_MYXSD
Xaa-Pro aminopeptidase family enzyme {ECO:0000313|EMBL:AKF82711.1}; TaxID=1334629 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" s
Xaa-Pro aminopeptidase family enzyme
13_1_20cm_4_scaffold_4550_12
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

14624..15325
DNA (702bp) protein (234aa)
QlcA n=1 Tax=uncultured bacterium 259 RepID=E3T6S5_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
beta-lactamase domain protein
13_1_20cm_4_scaffold_4550_13
Myxococcus xanthus, Myxococcus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15322..15810)
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=2 Tax=Myxococcus xanthus RepID=Q1DFJ5_MYXXD
Uncharacterized protein {ECO:0000313|EMBL:ABF92407.1}; TaxID=246197 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Myxococcaceae; Myxococcus.;" source="Myxococ
hypothetical protein
13_1_20cm_4_scaffold_4550_14
Methylobacterium sp. 4-46, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15864..16511
DNA (648bp) protein (216aa)
Dienelactone hydrolase n=1 Tax=Methylobacterium sp. (strain 4-46) RepID=B0UIT9_METS4
Dienelactone hydrolase {ECO:0000313|EMBL:ACA19416.1}; TaxID=426117 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Methylobacteriu
dienelactone hydrolase
13_1_20cm_4_scaffold_4550_15
Bradyrhizobium japonicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16524..17456
DNA (933bp) protein (311aa)
Metal-dependent hydrolase, beta-lactamase superfamily II
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 83 RepID=UPI00036E3414
Uncharacterized protein {ECO:0000313|EMBL:BAL09316.1}; TaxID=1037409 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium ja
metal-dependent hydrolase
13_1_20cm_4_scaffold_4550_16
Desulfovibrio sp. X2, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17488..17847
DNA (360bp) protein (120aa)
Cupin 2 conserved barrel domain protein n=1 Tax=Desulfovibrio sp. X2 RepID=S7VC87_9DELT
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:EPR44289.1}; TaxID=941449 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" so
hypothetical protein
13_1_20cm_4_scaffold_4550_17
Methylobacterium oryzae, Methylobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17886..18959
DNA (1074bp) protein (358aa)
hypothetical protein n=1 Tax=Methylobacterium sp. WSM2598 RepID=UPI000377ED16 rbh
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:AIQ89894.1}; TaxID=693986 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Methylobacterium.;" source="Meth
Alpha/beta hydrolase fold protein
13_1_20cm_4_scaffold_4550_18
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

comp(18956..19330)
DNA (375bp) protein (125aa)
hypothetical protein n=1 Tax=Thermus scotoductus RepID=UPI00037CE42D
hypothetical protein Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_4550_19
Thermus oshimai, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

Not on your lists

comp(19330..20280)
DNA (951bp) protein (317aa)
Putative aminoglycoside phosphotransferase n=1 Tax=Thermus oshimai JL-2 RepID=K7QWY9_THEOS
Putative aminoglycoside phosphotransferase {ECO:0000313|EMBL:AFV77431.1}; TaxID=751945 species="Bacteria; Deinococcus-Thermus; Deinococci; Thermales; Thermaceae; Thermus.;" source="Thermus oshimai JL-
putative aminoglycoside phosphotransferase
Displaying 19 items

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