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13_1_20cm_4_scaffold_4597

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4597_1
unknown

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1..447
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_20cm_4_scaffold_4597_2
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(356..889)
DNA (534bp) protein (178aa)
formiminotransferase-cyclodeaminase (EC:2.1.2.5 4.3.1.4); K13990 glutamate formiminotransferase / formiminotetrahydrofolate cyclodeaminase [EC:2.1.2.5 4.3.1.4] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes
13_1_20cm_4_scaffold_4597_3

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comp(964..2409)
DNA (1446bp) protein (482aa)
hypothetical protein n=1 Tax=actinobacterium SCGC AAA023-J06 RepID=UPI0003757B94
Uncharacterized protein {ECO:0000313|EMBL:KGA15566.1}; TaxID=449393 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="freshwater metagenome.;"
trimethylamine methyltransferase subfamily protein
13_1_20cm_4_scaffold_4597_4
Heterobasidion irregulare, Heterobasidion, Russulales, Agaricomycetes, Basidiomycota, Fungi

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2575..4422
DNA (1848bp) protein (616aa)
Putative uncharacterized protein n=1 Tax=Schizophyllum commune (strain H4-8 / FGSC 9210) RepID=D8QDM2_SCHCM
Uncharacterized protein {ECO:0000313|EMBL:ETW81078.1}; TaxID=747525 species="Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Russulales; Bondarzewiaceae; Heterobasidion; Het
hypothetical protein
13_1_20cm_4_scaffold_4597_5
Trichoderma harzianum, Trichoderma, Hypocreales, Hypocreomycetidae, Ascomycota, Fungi

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4364..4933
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Hypocrea atroviridis (strain ATCC 20476 / IMI 206040) RepID=G9NW16_HYPAI
Regulator-nonsense transcripts 1 {ECO:0000313|EMBL:KKP00821.1}; TaxID=5544 species="Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Hypocreales; Hypocreaceae
DNA helicase
13_1_20cm_4_scaffold_4597_6
CG_Pacearch_06, Pacearchaeota, Archaea

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4975..5403
DNA (429bp) protein (143aa)
histidine triad (HIT) protein n=1 Tax=Streptomyces sp. LaPpAH-202 RepID=UPI000381DB49
histidine triad (HIT) protein Tax=CG_Pacearch_06
histidine triad (HIT) protein
13_1_20cm_4_scaffold_4597_7
unknown

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5520..5741
DNA (222bp) protein (74aa)

This feature has no annotations

13_1_20cm_4_scaffold_4597_8
unknown

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comp(5738..6181)
DNA (444bp) protein (148aa)

This feature has no annotations

13_1_20cm_4_scaffold_4597_9
unknown

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6223..7671
DNA (1449bp) protein (483aa)

This feature has no annotations

13_1_20cm_4_scaffold_4597_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

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7922..9286
DNA (1365bp) protein (455aa)
putative fatty-acid--CoA ligase (EC:6.2.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
putative fatty-acid--CoA ligase (EC:6.2.1.-)
AMP-dependent synthetase and ligase id=4143225 bin=GWA2_Methylomirabilis_73_35 species=Ilumatobacter coccineus genus=Ilumatobacter taxon_order=Acidimicrobiales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_20cm_4_scaffold_4597_11
Conexibacter woesei, Conexibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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comp(9283..10212)
DNA (930bp) protein (310aa)
Myo-inosose-2 dehydratase {ECO:0000313|EMBL:ADB53853.1}; EC=4.2.1.44 {ECO:0000313|EMBL:ADB53853.1};; TaxID=469383 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales; Conexibactera
myo-inosose-2 dehydratase (EC:4.2.1.44)
Myo-inosose-2 dehydratase n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3EZL5_CONWI
13_1_20cm_4_scaffold_4597_12
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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10247..10684
DNA (438bp) protein (146aa)
Thioesterase superfamily protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCB3_GEOOG
Thioesterase superfamily protein {ECO:0000313|EMBL:ADB76241.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus ob
thioesterase superfamily protein
13_1_20cm_4_scaffold_4597_13
Lysobacter concretionis, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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10753..11463
DNA (711bp) protein (237aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Kineococcus radiotolerans (strain ATCC BAA-149 / DSM 14245 / SRS30216) RepID=A6WFA5_KINRD
Lipoate--protein ligase {ECO:0000313|EMBL:KGM51794.1}; TaxID=1122185 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacter concret
biotin/lipoate A/B protein ligase
13_1_20cm_4_scaffold_4597_14
RBG_19FT_COMBO_Actinobacteria_70_19_curated, Actinobacteria, Bacteria

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comp(11464..12381)
DNA (918bp) protein (306aa)
Quaternary amine uptake ABC transporter (QAT) family, periplasmic amine-binding protein n=1 Tax=Klebsiella oxytoca M5al RepID=K6JPH9_KLEOX
putative glycine betaine/choline-binding (Lipo) protein of an ABC-type transport system (Osmoprotectant binding protein); K05845 osmoprotectant transport system substrate-binding protein Tax=RBG_19FT_
quaternary ammonium transporter
13_1_20cm_4_scaffold_4597_15
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(12479..13723)
DNA (1245bp) protein (415aa)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI00037C277F
Binding-protein-dependent transporter system inner membrane protein {ECO:0000313|EMBL:KEZ78419.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaera
ABC transporter permease
13_1_20cm_4_scaffold_4597_16
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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13876..14874
DNA (999bp) protein (333aa)
ABC transporter related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AYH9_RUBXD
ProV: glycine betaine/L-proline transport ATP binding subunit {ECO:0000313|EMBL:AHY46179.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacte
proV: glycine betaine/L-proline transport ATP binding subunit
13_1_20cm_4_scaffold_4597_17
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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14858..15226
DNA (369bp) protein (123aa)
Pyridine nucleotide-disulphide oxidoreductase dimerisation region n=1 Tax=Frankia sp. (strain CcI3) RepID=Q2JEH1_FRASC
Variovorax paradoxus strain MEDvA23 contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31548.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
pyridine nucleotide-disulfide oxidoreductase dimerisation subunit
Displaying 17 items

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