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13_1_20cm_4_scaffold_4786

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_4786_1
unknown

Not on your lists

comp(2..70)
DNA (69bp) protein (23aa)

This feature has no annotations

13_1_20cm_4_scaffold_4786_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(84..746)
DNA (663bp) protein (221aa)
clpP; ATP-dependent Clp protease proteolytic subunit clpP (EC:3.4.21.92); K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
clpP; ATP-dependent Clp protease proteolytic subunit clpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9Y3_9BACT
13_1_20cm_4_scaffold_4786_3
RBG_19FT_COMBO_Nitrospirae_58_9_curated, Nitrospirae, Bacteria

Not on your lists

comp(784..2070)
DNA (1287bp) protein (429aa)
Trigger factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9Y4_9BACT
tig; trigger factor (tF); K03545 trigger factor Tax=RBG_19FT_COMBO_Nitrospirae_58_9_curated
tig; trigger factor (tF)
13_1_20cm_4_scaffold_4786_trna_3
unknown

Not on your lists

comp(2103..2184)
DNA (82bp)
transferRNA
13_1_20cm_4_scaffold_4786_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(2280..2768)
DNA (489bp) protein (163aa)
Acetyltransferase, GNAT family n=1 Tax=Salinibacter ruber (strain M8) RepID=D5HD32_SALRM
GNAT family acetyltransferase Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
GNAT family acetyltransferase
13_1_20cm_4_scaffold_4786_5
unknown

Not on your lists

comp(2777..3349)
DNA (573bp) protein (191aa)

This feature has no annotations

13_1_20cm_4_scaffold_4786_6
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3346..4404)
DNA (1059bp) protein (353aa)
DSBA oxidoreductase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MF76_9BACT
DSBA oxidoreductase Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
DSBA oxidoreductase
13_1_20cm_4_scaffold_4786_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(4479..5354)
DNA (876bp) protein (292aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PJ94_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK43468.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_4_scaffold_4786_8
RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated, Acidobacteria, Bacteria

Not on your lists

comp(5421..6305)
DNA (885bp) protein (295aa)
HD domain protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQ30_SYNAS
HD domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_60_22_curated
HD domain-containing protein
13_1_20cm_4_scaffold_4786_9
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(6287..7441)
DNA (1155bp) protein (385aa)
HD domain protein n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=Q2LQ30_SYNAS
HD domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
HD domain-containing protein
13_1_20cm_4_scaffold_4786_10
unknown

Not on your lists

comp(7625..7855)
DNA (231bp) protein (77aa)

This feature has no annotations

13_1_20cm_4_scaffold_4786_trna_2
unknown

Not on your lists

comp(8177..8249)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_4786_trna_1
unknown

Not on your lists

comp(8283..8355)
DNA (73bp)
transferRNA
13_1_20cm_4_scaffold_4786_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8401..8985)
DNA (585bp) protein (195aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P886_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_20cm_4_scaffold_4786_12
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

9077..10285
DNA (1209bp) protein (403aa)
Bifunctional protein PutA {ECO:0000313|EMBL:CBK42185.1}; EC=1.5.1.12 {ECO:0000313|EMBL:CBK42185.1};; EC=1.5.99.8 {ECO:0000313|EMBL:CBK42185.1};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospira
putA; bifunctional protein PutA (EC:1.5.1.12 1.5.99.8)
Bifunctional protein PutA n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PFZ8_9BACT
13_1_20cm_4_scaffold_4786_13
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10895..11839
DNA (945bp) protein (315aa)
putA; bifunctional protein PutA (EC:1.5.1.12 1.5.99.8); K13821 proline dehydrogenase / delta 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.99.8 1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_cu
putA; bifunctional protein PutA (EC:1.5.1.12 1.5.99.8)
Proline dehydrogenase and Delta-1-pyrroline-5-carboxylate dehydrogenase id=4883596 bin=GWC2_Geobacteraceae_55_20 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Geobacteraceae_55_20 organism_group=Deltaproteobacteria
13_1_20cm_4_scaffold_4786_14
unknown

Not on your lists

11895..12221
DNA (327bp) protein (109aa)

This feature has no annotations

13_1_20cm_4_scaffold_4786_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

12364..12807
DNA (444bp) protein (148aa)
Adenosylmethionine decarboxylase {ECO:0000256|SAAS:SAAS00093036}; EC=4.1.1.50 {ECO:0000256|SAAS:SAAS00093036};; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB83_9BACT
hypothetical protein
13_1_20cm_4_scaffold_4786_16
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(12849..13880)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P7Z8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK43630.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_4_scaffold_4786_17
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(13905..14570)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PB75_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK40484.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
hypothetical protein
13_1_20cm_4_scaffold_4786_18
unknown

Not on your lists

comp(14639..14965)
DNA (327bp) protein (109aa)

This feature has no annotations

Displaying 21 items

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