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13_1_20cm_4_scaffold_5047

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5047_1
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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3..536
DNA (534bp) protein (178aa)
Alpha/beta superfamily hydrolase n=1 Tax=Desulfomonile tiedjei (strain ATCC 49306 / DSM 6799 / DCB-1) RepID=I4CEA3_DESTA
hypothetical protein; K06889 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
alpha/beta superfamily hydrolase
13_1_20cm_4_scaffold_5047_2
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(529..1380)
DNA (852bp) protein (284aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_5047_3
Gemmatimonas aurantiaca, Gemmatimonas, Gemmatimonadales, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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1550..2629
DNA (1080bp) protein (360aa)
Putative branched-chain amino acid-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N5_GEMAT
Putative branched-chain amino acid-binding protein {ECO:0000313|EMBL:BAH37545.1}; TaxID=379066 species="Bacteria; Gemmatimonadetes; Gemmatimonadales; Gemmatimonadaceae; Gemmatimonas.;" source="Gemmati
putative branched-chain amino acid-binding protein
13_1_20cm_4_scaffold_5047_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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2629..4326
DNA (1698bp) protein (566aa)
Methyl-accepting chemotaxis protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5N4_GEMAT
methyl-accepting chemotaxis protein; K03406 methyl-accepting chemotaxis protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
methyl-accepting chemotaxis protein
13_1_20cm_4_scaffold_5047_5
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(4334..4660)
DNA (327bp) protein (109aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_5047_6
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(4738..5001)
DNA (264bp) protein (88aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_5047_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5465..5659
DNA (195bp) protein (65aa)
Translation initiation factor IF-1 n=2 Tax=Roseiflexus RepID=IF1_ROSCS
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RBG_16_Gemmatimonadetes_66_8_curated
infA; translation initiation factor IF-1
13_1_20cm_4_scaffold_5047_8

Not on your lists

comp(5771..6943)
DNA (1173bp) protein (391aa)
Putative uncharacterized protein n=1 Tax=uncultured bacterium BAC10-4 RepID=Q4JIU5_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:AAY96666.1}; TaxID=333425 species="Bacteria; environmental samples.;" source="uncultured bacterium BAC10-4.;"
outer membrane channel
13_1_20cm_4_scaffold_5047_9
R_Methylotenera_45_14, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7324..9063)
DNA (1740bp) protein (580aa)
exaA; quinoprotein ethanol dehydrogenase ExaA (EC:1.1.2.8) Tax=RIFCSPLOWO2_02_FULL_Methylotenera_45_14_curated
Quino(Hemo)protein alcohol dehydrogenase, PQQ-dependent n=1 Tax=Oxalobacteraceae bacterium IMCC9480 RepID=F1VUD7_9BURK
quinoprotein ethanol dehydrogenase
13_1_20cm_4_scaffold_5047_10
Candidatus Entotheonella sp. TSY2, Candidatus Entotheonella, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9089..11248)
DNA (2160bp) protein (720aa)
hypothetical protein n=1 Tax=Thioalkalivibrio sp. ALJ17 RepID=UPI00036F4AA4
Uncharacterized protein {ECO:0000313|EMBL:ETX00812.1}; TaxID=1429439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Candidatus Entotheonella.;" source="Candidatus Entotheonella sp. TSY2.;"
TonB-dependent receptor
13_1_20cm_4_scaffold_5047_11
Thermodesulfatator indicus, Thermodesulfatator, Thermodesulfobacteriales, Thermodesulfobacteria, Thermodesulfobacteria, Bacteria

Not on your lists

comp(11253..11435)
DNA (183bp) protein (61aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=667014 species="Bacteria; Thermodesulfobacteria; Thermodesulfobacteriales; Thermodesulfobacteri
signal peptidase I (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Thermodesulfatator indicus (strain DSM 15286 / JCM 11887 / CIR29812) RepID=F8AB30_THEID
13_1_20cm_4_scaffold_5047_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(11426..11836)
DNA (411bp) protein (137aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Signal peptidase I n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1AC84_GEMAT
signal peptidase I
13_1_20cm_4_scaffold_5047_13
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

11916..12236
DNA (321bp) protein (107aa)
Tax=RBG_16_Gemmatimonadetes_66_8_curated
13_1_20cm_4_scaffold_5047_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

Not on your lists

12245..14371
DNA (2127bp) protein (709aa)
Transketolase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MKA2_9BACT
Transketolase {ECO:0000313|EMBL:AHG89069.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
transketolase
13_1_20cm_4_scaffold_5047_15
Thermaerobacter marianensis, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14253..15152)
DNA (900bp) protein (300aa)
Protoporphyrinogen oxidase {ECO:0000313|EMBL:ADU50881.1}; EC=1.3.3.4 {ECO:0000313|EMBL:ADU50881.1};; Flags: Precursor;; TaxID=644966 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridi
protoporphyrinogen oxidase (EC:1.3.3.4)
Protoporphyrinogen oxidase n=1 Tax=Thermaerobacter marianensis (strain ATCC 700841 / DSM 12885 / JCM 10246 / 7p75a) RepID=E6SIH5_THEM7
13_1_20cm_4_scaffold_5047_16
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(15149..15979)
DNA (831bp) protein (277aa)
Ferrochelatase {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607}; EC=4.99.1.1 {ECO:0000256|HAMAP-Rule:MF_00323, ECO:0000256|RuleBase:RU000607};; Heme synthase {ECO:0000256|HAMAP-Rule:MF
ferrochelatase (EC:4.99.1.1)
Ferrochelatase n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFF6_9CHLR
13_1_20cm_4_scaffold_5047_17
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(16922..18019)
DNA (1098bp) protein (366aa)
cld2; chlorite dismutase (EC:1.13.11.49); K09162 hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cld2; chlorite dismutase (EC:1.13.11.49)
chlorite dismutase n=1 Tax=Candidatus Poribacteria sp. WGA-A3 RepID=UPI0001C2AC35
13_1_20cm_4_scaffold_5047_18
unknown

Not on your lists

comp(18063..18263)
DNA (201bp) protein (67aa)

This feature has no annotations

13_1_20cm_4_scaffold_5047_19
unknown

Not on your lists

comp(18260..18409)
DNA (150bp) protein (50aa)

This feature has no annotations

13_1_20cm_4_scaffold_5047_20
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(18363..19148)
DNA (786bp) protein (262aa)
protoheme IX farnesyltransferase; K02301 protoheme IX farnesyltransferase [EC:2.5.1.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Protoheme IX farnesyltransferase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DQ28_SINAD
protoheme IX farnesyltransferase
13_1_20cm_4_scaffold_5047_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19187..19462)
DNA (276bp) protein (92aa)
caa(3)-type oxidase, subunit IV Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Caa(3)-type oxidase, subunit IV id=1881831 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Solibacter usitatus genus=Candidatus Solibacter taxon_order=Solibacterales taxon_class=Solibacteres phylum=Acidobacteria tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
caa(3)-type oxidase, subunit IV
13_1_20cm_4_scaffold_5047_22
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(19476..20153)
DNA (678bp) protein (226aa)
ctaE; putative transmembrane cytochrome oxidase subunit; K02276 cytochrome c oxidase subunit III [EC:1.9.3.1] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cytochrome oxidase subunit III n=1 Tax=Poribacteria bacterium WGA-3G RepID=UPI0003B3081F
cytochrome c oxidase subunit III
13_1_20cm_4_scaffold_5047_23
GWA2_OP3_52_8_curated, Omnitrophica, Bacteria

Not on your lists

comp(20175..20855)
DNA (681bp) protein (227aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=GWA2_OP3_52_8_curated
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=14627498 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
heme/copper-type cytochrome/quinol oxidase, subunit 1
13_1_20cm_4_scaffold_5047_24
RLO_Deltaproteobacteria_60_19, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21462..21695)
DNA (234bp) protein (78aa)
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_60_19_curated
cytochrome c oxidase subunit I (EC:1.9.3.1); K02274 cytochrome c oxidase subunit I [EC:1.9.3.1] id=14429800 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin3_NC10 organism_group=NC10
heme/copper-type cytochrome/quinol oxidase, subunit 1
13_1_20cm_4_scaffold_5047_25
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

comp(21692..22363)
DNA (672bp) protein (224aa)
heme/copper-type cytochrome/quinol oxidases subunit 2 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Putative cytochrome c oxidase, subunit II id=1881842 bin=GWD2_Deltaproteobacteria_55_8 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWD2_Deltaproteobacteria_55_8 organism_group=Deltaproteobacteria
heme/copper-type cytochrome/quinol oxidases subunit 2
13_1_20cm_4_scaffold_5047_26
R_Acidobacteria_68_18, Acidobacteria, Bacteria

Not on your lists

comp(22383..22610)
DNA (228bp) protein (76aa)
Putative uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) RepID=Q01YC0_SOLUE
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_68_18_curated
hypothetical protein
Displaying 26 items

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