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13_1_20cm_4_scaffold_508

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_508_1
Patulibacter medicamentivorans, Patulibacter, Solirubrobacterales, Thermoleophilia, Actinobacteria, Bacteria

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1..201
DNA (201bp) protein (67aa)
ATP phosphoribosyltransferase regulatory subunit n=1 Tax=Patulibacter medicamentivorans RepID=H0E3F4_9ACTN
ATP phosphoribosyltransferase regulatory subunit {ECO:0000256|HAMAP-Rule:MF_00125, ECO:0000256|SAAS:SAAS00089029}; TaxID=1097667 species="Bacteria; Actinobacteria; Thermoleophilia; Solirubrobacterales
histidine--tRNA ligase
13_1_20cm_4_scaffold_508_2
GWA2_Rokubacteria_70_23_curated, Rokubacteria, Bacteria

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198..839
DNA (642bp) protein (214aa)
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17) Tax=GWA2_Rokubacteria_70_23_curated
hisG; ATP phosphoribosyltransferase (EC:2.4.2.17)
UDP-N-acetylglucosamine 1-carboxyvinyltransferase id=4831881 bin=GWC2_Methylomirabilis_70_24 species=Burkholderia rhizoxinica genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
13_1_20cm_4_scaffold_508_3
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

comp(829..1686)
DNA (858bp) protein (286aa)
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262); K00097 4-hydroxythreonine-4-phosphate dehydrogenase [EC:1.1.1.262] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
4-hydroxythreonine-4-phosphate dehydrogenase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L0_GEMAT
4-hydroxythreonine-4-phosphate dehydrogenase
13_1_20cm_4_scaffold_508_4
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(1712..2944)
DNA (1233bp) protein (411aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L1_GEMAT
SurA domain-containing protein
13_1_20cm_4_scaffold_508_5
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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comp(2946..4403)
DNA (1458bp) protein (486aa)
putative peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8); K03771 peptidyl-prolyl cis-trans isomerase SurA [EC:5.2.1.8] Tax=GWC2_Gemmatimonadetes_71_10_curated
Putative peptidyl-prolyl cis-trans isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L2_GEMAT
PpiC-type peptidyl-prolyl cis-trans isomerase
13_1_20cm_4_scaffold_508_6
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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comp(4413..7691)
DNA (3279bp) protein (1093aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=861299 species="Bacteria; Ge
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT
transcription-repair coupling factor
13_1_20cm_4_scaffold_508_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

comp(7691..9424)
DNA (1734bp) protein (578aa)
Hypothetical membrane protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L4_GEMAT
hypothetical membrane protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
double-transmembrane region domain protein
13_1_20cm_4_scaffold_508_8
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(9421..10305)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L5_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
protein of unknown function DUF58
13_1_20cm_4_scaffold_508_9
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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10479..11840
DNA (1362bp) protein (454aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Streptococcus sp. C300 RepID=E9FIU8_9STRE
GF13555 gene product from transcript GF13555-RA Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
cell wall surface anchor family protein
13_1_20cm_4_scaffold_508_10
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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11932..13467
DNA (1536bp) protein (512aa)
peptidase M28 Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Aminopeptidase id=3410210 bin=GWA2_Ignavibacteria_55_11 species=Microscilla marina genus=Microscilla taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWA2_Ignavibacteria_55_11 organism_group=Ignavibacteria organism_desc=Closely related to GWC2 genome
peptidase M28
13_1_20cm_4_scaffold_508_11
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(13471..14538)
DNA (1068bp) protein (356aa)
Transcription termination factor Rho n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT
transcription termination factor; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
transcription termination factor
13_1_20cm_4_scaffold_508_12
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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14586..16253
DNA (1668bp) protein (556aa)
Elongation factor 4 n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L7_GEMAT
lepA; GTP-binding protein LepA; K03596 GTP-binding protein LepA Tax=GWC2_Gemmatimonadetes_71_10_curated
lepA; GTP-binding protein LepA
13_1_20cm_4_scaffold_508_13
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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16246..17283
DNA (1038bp) protein (346aa)
putative heptosyltransferase (EC:2.4.-.-); K02843 heptosyltransferase II [EC:2.4.-.-] Tax=GWC2_Gemmatimonadetes_71_10_curated
glycosyl transferase family 9
Putative heptosyltransferase id=3656687 bin=GWC2_Ignavibacteria_56_12 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
13_1_20cm_4_scaffold_508_14
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

Not on your lists

17261..18226
DNA (966bp) protein (322aa)
glk; glucokinase (EC:2.7.1.2); K00845 glucokinase [EC:2.7.1.2] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Glucokinase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L9_GEMAT
ROK family protein
13_1_20cm_4_scaffold_508_15
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

Not on your lists

18250..19173
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M0_GEMAT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
PfkB domain protein
13_1_20cm_4_scaffold_508_16
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

19170..20087
DNA (918bp) protein (306aa)
Uncharacterized protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M1_GEMAT
hypothetical protein Tax=RBG_16_Gemmatimonadetes_66_8_curated
hypothetical protein
13_1_20cm_4_scaffold_508_17
unknown

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20084..20530
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_20cm_4_scaffold_508_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

Not on your lists

20527..21330
DNA (804bp) protein (268aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037F5D1C
cystathionine beta-lyase/cystathionine gamma-synthase Tax=RBG_16_Gemmatimonadetes_66_8_curated
Cys/Met metabolism pyridoxal-phosphate-dependent protein
13_1_20cm_4_scaffold_508_19
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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21312..21569
DNA (258bp) protein (86aa)
methionine gamma-lyase (EC:4.4.1.11); K01761 methionine-gamma-lyase [EC:4.4.1.11] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
Uncharacterized protein n=1 Tax=Halomonas sp. PBN3 RepID=U7P969_9GAMM
Cys/Met metabolism pyridoxal-phosphate-dependent protein
13_1_20cm_4_scaffold_508_20
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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21570..22265
DNA (696bp) protein (232aa)
Cell division ATP-binding protein FtsE n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M5_GEMAT
ftsE; cell division ATP-binding protein FtsE; K09812 cell division transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
cell division ATP-binding protein FtsE
13_1_20cm_4_scaffold_508_21
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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22262..22684
DNA (423bp) protein (141aa)
Cell division protein FtsX n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9M6_GEMAT
ftsX; cell division protein FtsX; K09811 cell division transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
ftsX; cell division protein FtsX
Displaying 21 items

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