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13_1_20cm_4_scaffold_5187

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_5187_1
Nitrobacter hamburgensis, Nitrobacter, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3..764
DNA (762bp) protein (254aa)
General substrate transporter n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QQ97_NITHX
General substrate transporter {ECO:0000313|EMBL:ABE61600.1}; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter ham
general substrate transporter
13_1_20cm_4_scaffold_5187_2
BJP_S1_SUB10_Methylophilales_55_32, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(841..1296)
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZ46_PSEUX
ycdZ; inner membrane protein ycdZ
Tax=BJP_S1_SUB10_Methylophilales_55_32
13_1_20cm_4_scaffold_5187_3
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(1440..2048)
DNA (609bp) protein (203aa)
Putative two-component response regulator n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1B7_CALAS
two component LuxR family transcriptional regulator Tax=RBG_16_Chloroflexi_63_12_curated
putative two-component response regulator
13_1_20cm_4_scaffold_5187_4
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

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comp(2059..2742)
DNA (684bp) protein (228aa)
Putative two-component histidine kinase n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I1B6_CALAS
histidine kinase Tax=RBG_16_Chloroflexi_63_12_curated
putative two-component histidine kinase
13_1_20cm_4_scaffold_5187_5
RLO_Gemmatimonadetes_68_9, Gemmatimonadetes, Bacteria

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comp(2739..4664)
DNA (1926bp) protein (642aa)
glucosamine-6-phosphate deaminase-like protein; K02564 glucosamine-6-phosphate deaminase [EC:3.5.99.6] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated
Putative glucosamine-6-phosphate isomerase n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A967_GEMAT
glucosamine-6-phosphate isomerase
13_1_20cm_4_scaffold_5187_6
unknown

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4877..5323
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_20cm_4_scaffold_5187_7
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5320..5889
DNA (570bp) protein (190aa)
PAS/PAC sensor signal transduction histidine kinase n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U4C9_DEIML
PAS/PAC sensor signal transduction histidine kinase Tax=RBG_16_Gemmatimonadetes_66_8_curated
PAS/PAC sensor signal transduction histidine kinase
13_1_20cm_4_scaffold_5187_8
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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5919..7469
DNA (1551bp) protein (517aa)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI00031DFAC0
peptidase M28 Tax=RBG_16_Gemmatimonadetes_66_8_curated
peptidase M28
13_1_20cm_4_scaffold_5187_9
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(7466..7942)
DNA (477bp) protein (159aa)
Glyoxalase/bleomycin resistance protein/dioxygenase n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZPW1_OPITP
glyoxalase/bleomycin resistance protein/dioxygenase; K07104 Tax=RBG_16_Gemmatimonadetes_66_8_curated
glyoxalase/bleomycin resistance protein/dioxygenase
13_1_20cm_4_scaffold_5187_10
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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7987..9615
DNA (1629bp) protein (543aa)
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12); K00294 1-pyrroline-5-carboxylate dehydrogenase [EC:1.5.1.12] Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.5.1.12)
NAD-dependent aldehyde dehydrogenase id=2517765 bin=GWA2_Elusimicrobia_56_46 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
13_1_20cm_4_scaffold_5187_11
RLO_Nitrospinae_39_16, Nitrospinae, Bacteria

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9612..10208
DNA (597bp) protein (199aa)
Uncharacterized protein n=1 Tax=Nitrospina gracilis 3/211 RepID=M1YKB3_9BACT
hypothetical protein Tax=RifCSPlowO2_12_Nitrospinae_39_16_curated
13_1_20cm_4_scaffold_5187_12
R_Gemmatimonadetes_71_11, Gemmatimonadetes, Bacteria

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comp(10268..10444)
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2B6K0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated
hypothetical protein
13_1_20cm_4_scaffold_5187_13
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

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10884..12413
DNA (1530bp) protein (510aa)
hypothetical protein; K06888 Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
hypothetical protein; K06888 id=24560588 bin=RBG_19FT_COMBO_GAL15_69_19 tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
hypothetical protein
13_1_20cm_4_scaffold_5187_14
Gemmatimonadetes bacterium KBS708, Gemmatimonadetes, Gemmatimonadetes, Bacteria

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12510..13058
DNA (549bp) protein (183aa)
RNA polymerase ECF-type sigma factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A5K6_GEMAT
RNA polymerase sigma factor, sigma-70 family {ECO:0000313|EMBL:AHG92078.1}; TaxID=861299 species="Bacteria; Gemmatimonadetes.;" source="Gemmatimonadetes bacterium KBS708.;"
RNA polymerase sigma factor, sigma-70 family
13_1_20cm_4_scaffold_5187_15
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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13055..13663
DNA (609bp) protein (203aa)
putative glycosyl hydrolase, family 13 (EC:2.4.1.-)
Putative Glycosyl hydrolase, family 13 n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PDN4_9BACT
glycoside hydrolase family protein Tax=GWC2_Gemmatimonadetes_71_10_curated
13_1_20cm_4_scaffold_5187_16
GWC2_Gemmatimonadetes_71_10_curated, Gemmatimonadetes, Bacteria

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13660..14322
DNA (663bp) protein (221aa)
hypothetical protein Tax=GWC2_Gemmatimonadetes_71_10_curated
hypothetical protein
13_1_20cm_4_scaffold_5187_17
unknown

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14464..14574
DNA (111bp) protein (37aa)

This feature has no annotations

13_1_20cm_4_scaffold_5187_18
RBG_16_Gemmatimonadetes_66_8_curated, Gemmatimonadetes, Bacteria

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comp(14562..15794)
DNA (1233bp) protein (411aa)
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] Tax=RBG_16_Gemmatimonadetes_66_8_curated
rca:Rcas_3355 arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1); K00620 glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1] id=1246557 bin=RBG9 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=RBG9 organism_group=Chloroflexi
arginine biosynthesis bifunctional protein ArgJ (EC:2.3.1.1)
Displaying 18 items

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